New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1298277 = | NA (NA) | 10 (0.140) | 5/238 | NT | NA | intergenic (+130/+299) | PP_1133/PP_1134 | transposase/hypothetical protein |
? | NC_002947 | 1298313 = | NA (NA) | intergenic (+166/+263) | PP_1133/PP_1134 | transposase/hypothetical protein |
GCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1298430‑1298277 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaatACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACAC > NC_002947/1298313‑1298461 GCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCCTATGAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGC > 1:509699/1‑150 TGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGA < 2:1788679/150‑1 TGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGA > 2:1031954/1‑150 TGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGA > 1:796127/1‑150 TGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGA < 1:1901740/150‑1 TGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT > 2:157041/1‑150 TGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT < 1:214607/150‑1 TGCCGACAGGGATTAACGCCGATGCCATTTAGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT < 2:1315321/150‑1 AGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT < 2:1423352/143‑1 AGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT > 1:1423352/1‑143 TTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAA < 1:9054/137‑1 TTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAA > 2:9054/1‑137 CGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCC < 2:128552/150‑1 ACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT > 1:1642038/1‑115 ACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT < 2:1642038/115‑1 TCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT > 2:111792/1‑109 TCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT < 1:111792/109‑1 TTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGC < 1:148434/102‑1 TTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGC > 2:148434/1‑102 AAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGC > 2:1921184/1‑93 AAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGC < 1:1921184/93‑1 GTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT > 1:1000874/1‑83 GTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT < 2:1000874/83‑1 TCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTG < 1:193441/122‑1 TCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTG > 2:193441/1‑122 CCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAAT > 2:7631/1‑150 GAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGT > 2:1263799/1‑150 ATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATC < 1:7631/150‑1 TAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCGGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAAT > 1:1879159/1‑133 TAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAAT < 2:1879159/133‑1 CAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGCCGAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAAT < 2:264286/113‑1 CAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGCCGAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAAT > 1:264286/1‑113 CGAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGA < 1:470346/150‑1 CGAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGT < 1:1378857/148‑1 CGAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGT > 2:1378857/1‑148 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAGGAGTGAA < 1:826859/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 2:977883/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 2:1690614/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 2:401340/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 2:808608/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 2:1552711/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 1:1865205/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 1:23322/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 1:71916/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 2:1117828/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCC > 1:667117/1‑110 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCC < 2:667117/110‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCC > 1:1259763/1‑109 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCACGAATTATATAGTGGCCCAAATTGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 1:1690957/150‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTCGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCC < 2:1259763/109‑1 GAATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGAGGGAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 1:18071/150‑1 AATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAAC > 2:473597/1‑150 AATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTC > 2:1726863/1‑68 AATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTC < 1:1726863/68‑1 ATACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGCCAAGCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACA < 2:759645/150‑1 TACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACAC > 2:1667950/1‑150 TACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGA < 2:1562679/142‑1 TACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGA > 1:1562679/1‑142 GCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1298430‑1298277 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaatACTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACAC > NC_002947/1298313‑1298461 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |