New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1354379 =	71 (0.970)	4 (0.060)	4/232	NT	5.3%	coding (1004/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha
	?	NC_002947	1354422 =	77 (1.130)					coding (961/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha

AGGCGATCAACCACGAGCGCGACCAGCAGTTTACCTACCTGGGCCTGCAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1354529‑1354379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagaaaaCCTGCGGCAGCTCGAAGCGCACGCCATCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTTTCCAGGTCGAAGTCGGCCAGGGCCG  >  NC_002947/1354422‑1354565                                                                                                                                                                                                                                                                                                         AGGCGATCAACCACGAGCGCGACCAGCAGTTTACCTACCTGGGCCTGCAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAA                                                                                                                                                   >  1:1359040/1‑150                                                                                                        GCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAACCTGCGGCAGCTCGAAGCGCACGCCATCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTG                                                             <  1:167059/133‑1                                                                                                        GCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAACCTGCGGCAGCTCGAAGCGCACGCCATCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTG                                                             >  2:167059/1‑133                                                                                                               TTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAACCTGCGGCAGCTCGAAGCGCACGCCATCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTT                                     >  1:7640/1‑150                                                                                                                                     GCCTGGCGCTGGAAGAAAACCTGCGGCAGCTCGAAGCGCACGCCATCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTTTCCAGGTCGAAG               <  2:7640/150‑1                                                                                                                                                 AAGAAAACCTGCGGCAGCTCGAAGCGCACGCCATCCGTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTTTCCAGGTCGAAGTCGGCCAGGGCC   >  2:395747/1‑150                                                                                                                                                  AGAAAACCTGCGGCAGCTCGAAGCGCACGCCATCCTTGTGGATGAAGTATCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTTTCCAGGTCGAAGTCGGCCAGGGCCG  >  2:1643332/1‑150                                                                                                                                                   GAAAACCTGCGGCAGCTCGAAGCGCACGCCATCCTTGTGGATGAA                                                                                                          <  1:1858523/45‑1                                                                                                                                                   GAAAACCTGCGGCAGCTCGAAGCGCACGCCATCCTTGTGGATGAA                                                                                                          >  2:1858523/1‑45                                                                                                                                                                                                                                                                                                         AGGCGATCAACCACGAGCGCGACCAGCAGTTTACCTACCTGGGCCTGCAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTTTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAGAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1354529‑1354379 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagaaaaCCTGCGGCAGCTCGAAGCGCACGCCATCCTTGTGGATGAAGTAGCGGTCGTACAGGGTCTGCAGGCCCAGGTAGGTAAACTGCTGGTCGCGCTCGTGGTTGATCGCCTTGCCCAGTTTTTCCAGGTCGAAGTCGGCCAGGGCCG  >  NC_002947/1354422‑1354565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.