New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1377689 =69 (0.950)6 (0.080) 6/240 NT 8.3% coding (2592/2643 nt) PP_1202 phospholipids modification protein
?NC_002947 1377729 = 65 (0.920)coding (2552/2643 nt) PP_1202 phospholipids modification protein

TGACCCAGCGCTTGGGTTCGCTGGTGTTCCGCCGTGGTGAGCAGCTTTACAACTTCCAGGGGCTTCGACGCTTCAAGGACAAGTTCCAGCCGGACTGGGAACCCCGCTACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1377840‑1377689
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccATGTAGCGGGGTTCCCAGTCCGGCTGGAACTTGTCCTTGAAGCGTCGAAGCCCCTGGAAGTTGTAAAGCTGCTCACCACGGCGGAACACCAGCGAACCCAAGCGCTGGGTCAAGGGTGCGCCGCGCCTTGGT  >  NC_002947/1377729‑1377860
                                                                                                                                                                                                                                                                                            
TGACCCAGCGCTTGGGTTCGCTGGTGTTCCGCCGTGGTGAGCAGCTTTACAACTTCCAGGGGCTTCGACGCTTCAAGGACAAGTTCCAGCCGGACTGGGAACCCCGCTACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGG                                                                                                                                        <  1:1049439/150‑1
 GACCCAGCGCTTGGGTTCGCTGGTGTTCCGCCGTGGTGAGCAGCTTTACAACTTCCAGGGGCTTCGACGCTTCAAGGACAAGTTCCAGCCGGACTGGGAACCCCGCTACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGGC                                                                                                                                       <  2:1722112/150‑1
 GACCCAGCGCTTGGGTTCGCTGGTGTTCCGCCGTGGTGAGCAGCTTTACAACTTCCAGGGGCTTCGACGCTTCAAGGACAAGTTCCAGCCGCACTGCGAACCCCGCTACATGGCCGTGCCAGCCGGGATCGCCCCGCTGGTGGCACTGGC                                                                                                                                       <  2:1043011/150‑1
  ACCCAGCGCTTGGGTTCGCTGGTGTTCCGCCGTGGTGAGCAGCTTTACAACTTCCAGGGGCTTCGACGCTTCAAGGACAAGTTCCAGCCGGACTGGGAACCCCGCTACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGGCC                                                                                                                                      <  1:691946/150‑1
                                                                                            GACTGGGAACCCCGCTACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGGCCACGTAGCGGGGTTCCCAGTCCGGCTGGAACTTGTCCTTGAAGCGTCGAAGCCCCTGGAAGTTGTAAAGCTGCTCACCACGGCGGAACACC                                            >  2:1901695/1‑150
                                                                                                      CCCGCTACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGGCCATGTAGCGGGGTTCCCAGTCCGGCTGGAACTTGTCCTTGAAGCGTCGAAGCCCCTGGAAGTTGTAAAGCTGCTCACCACGGCGGAACACCAGCGAACCCA                                  >  1:1102527/1‑150
                                                                                                       CCGCTACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGGCCATGTAGCGGGGTTCCCAGTCCGGCTGGAACTTGTCCTTGAAGCGTC                                                                                        >  1:1543806/1‑95
                                                                                                       CCGCTACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGGCCATGTAGCGGGGTTCCCAGTCCGGCTGGAACTTGTCCTTGAAGCGTC                                                                                        <  2:1543806/95‑1
                                                                                                            ACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGGCCATGTAGCGGGTTTCCCAGTCCGACTGGAACTTGTCCTTGAAGCGTCGAAGCCCCTGGAAGTTGTAAAGCTGCTCACCACGGCGGAACACCAGCGAACCCAAGCGCT                            >  1:1109084/1‑150
                                                                                                                                      CCGCTGGTGGCACTGGCCATGTAGCGGGGTTCCCAGTCCGGCTGGAACTTGTCCTTGAAGCGTCGAAGCCCCTGGAAGTTGTAAAGCTGCTCACCACGGCGGAACACCAGCGAACCCAAGCGCTGGGTCAAGGGTGCGCCGCGCCTTGGT  <  1:1901695/150‑1
                                                                                                                                                                                                                                                                                            
TGACCCAGCGCTTGGGTTCGCTGGTGTTCCGCCGTGGTGAGCAGCTTTACAACTTCCAGGGGCTTCGACGCTTCAAGGACAAGTTCCAGCCGGACTGGGAACCCCGCTACATGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCACTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1377840‑1377689
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccATGTAGCGGGGTTCCCAGTCCGGCTGGAACTTGTCCTTGAAGCGTCGAAGCCCCTGGAAGTTGTAAAGCTGCTCACCACGGCGGAACACCAGCGAACCCAAGCGCTGGGTCAAGGGTGCGCCGCGCCTTGGT  >  NC_002947/1377729‑1377860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.