| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1499443 = | 74 (1.010) | 13 (0.220) | 6/202 | NT | 21.5% | intergenic (+13/‑153) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| ? | NC_002947 | 1499526 = | 35 (0.590) | intergenic (+96/‑70) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein | |||||
GCGTTCTAAGGGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1499613‑1499443‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCG > NC_002947/1499526‑1499670 GCGTTCTAAGGGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TT > 1:1484188/1‑150 CTAAGGGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGG < 1:630546/150‑1 TAAGGGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGG < 1:935802/150‑1 GGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACG > 2:1899604/1‑150 TCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCG > 1:1927567/1‑150 CATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGC < 2:25979/150‑1 GATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGCTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGaccc > 1:598843/1‑146 GCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCC > 2:470758/1‑103 GCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCC < 1:470758/103‑1 AATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGC < 2:825608/74‑1 AATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGC > 1:825608/1‑74 TGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTC > 1:1376719/1‑78 TGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTC < 2:1376719/78‑1 GGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTT > 2:845921/1‑134 GGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTT < 1:845921/134‑1 cctatctCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑TGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGA < 1:147502/143‑1 GTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGTT‑TTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCC > 2:1753780/1‑150 CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑TGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCCCTACCGAACCATGACagatccg > 2:147502/1‑143 CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAG > 2:1711148/1‑150 CCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAG > 1:116472/1‑150 CGCGAACACCGGCAAAGCCGGTGCCATGCACGGGGCCGCGTG‑T‑TTAACGGGCACGCGCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGA > 1:824474/1‑150 CGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGA > 1:573408/1‑150 GCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGAGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAA > 1:1701400/1‑150 CACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑TGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTAACATCACGCCGTGGGTTTTGTTGCCTCCCTAACGAATCATGACTCCCTTAGAACGCT > 2:1020587/1‑150 GCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGAT < 1:1711148/150‑1 CCATGCACCGCGGCGCCTG‑TGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGCGTCGCTGAGAACGCTATCAAGCAGATCTGAAA < 1:1020587/150‑1 CACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCA < 2:116472/150‑1 ACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTTTTTTTTTTTTAACGAATCATGACTCCCTTAGAACTCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAG > 2:237144/1‑150 GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAAC < 2:1698115/98‑1 GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAAC > 1:1698115/1‑98 CCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCG < 1:1753780/150‑1 GCGTTCTAAGGGAGTCATGATTCGTTAGCGAGGCAACAAAAAACGGGCCGTCACTGTAGCGATAGGCCCGCTTAATGGCAATCAGTCTGTGGGAGCGGGCGTGCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTG‑T‑TTCGCGGGCACGCCCGCTCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1499613‑1499443‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAAGCAGATCTGAAACGTCCCGACTTCTTCCATGACGCGGCGCAGGAAACTGCG > NC_002947/1499526‑1499670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |