New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1610482 =	56 (0.770)	4 (0.060)	4/236	NT	6.8%	intergenic (‑176/‑37)	PP_1411/PP_5470	GGDEF domain‑containing protein/hypothetical protein
	?	NC_002947	1610505 =	56 (0.810)					intergenic (‑199/‑14)	PP_1411/PP_5470	GGDEF domain‑containing protein/hypothetical protein

CATAGCGGTCGGTGGAGTAGTAGTCCGAACGGTAGTAGCCCCCGCGTTCATAGTACGGGGCGCAGGCCGAAGTCATCAGCCCCAGCAGGGCGATCAACAGGATTCGATAGGACATGGCGGCCTCCTGGACCGCTGGAGTGCCCGAACAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1610633‑1610482 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGACTTCGGCCTGCGCCCCGTACTATGAACGCGGGGGCTACTACCGTTCGGACTACTACTCCACCGACCGCTATGTGGCGCCGGGGTATTACC  >  NC_002947/1610505‑1610651                                                                                                                                                                                                                                                                                                             CATAGCGGTCGGTGGAGTAGTAGTCCGAACGGTAGTAGCCCCCGCGTTCATAGTACGGGGCGCAGGCCGAAGTCATCAGCCCCAGCAGGGCGATCAACAGGATTCGATAGGACATGGCGGCCTCCTGGACCGCTGGAGTGCCCGAACAGC                                                                                                                                                       >  1:1756840/1‑150   TAGCGGTCGGTGGAGTAGTAGTCCGAACGGTAGTAGCCCCCGCGTTCATAGTACGGGGCGCAGGCCGAAGTCATCAGCCCCAGCAGGGCGATCAACAGGATTCGATAGGACATGGCGGCCTCCTGGACCGCTGGAGTGCCCGAACAGCGG                                                                                                                                                     <  1:695234/150‑1                          CGAACGGTAGTAGCCCCCGCGTTCATAGTACGGGGCGCAGGCCGAAGTCATCAGCCCCAGCAGGGCGATCAACAGGATTCGATAGGACATGGCGGCCTCCTGGACCGCTGGAGTGCCCGAACAGCG                                                                                                                                                      <  1:225345/126‑1                          CGAACGGTAGTAGCCCCCGCGTTCATAGTACGGGGCGCAGGCCGAAGTCATCAGCCCCAGCAGGGCGATCAACAGGATTCGATAGGACATGGCGGCCTCCTGGACCGCTGGAGTGCCCGAACAGCG                                                                                                                                                      >  2:225345/1‑126                                                                                                                             CTGGACCGCTGGAGTGCCCGAACAGCGGTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGG                                                                                                     >  1:1214005/1‑76                                                                                                                             CTGGACCGCTGGAGTGCCCGAACAGCGGTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGG                                                                                                     <  2:1214005/76‑1                                                                                                                              TGGACCGCTGGAGTGCCCGAACAGCGGTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGAC                                                                                           <  1:1833211/85‑1                                                                                                                              TGGACCGCTGGAGTGCCCGAACAGCGGTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGAC                                                                                           >  2:1833211/1‑85                                                                                                                                                   CAGCGGTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGACTTCGGCCTGCGCCCCGTACTATGAACGCGGGGGCTACTACCGTTCGGACTACTACTCCACCGACCGCTATGTGGCGCCGGGGTATT     >  1:164736/1‑150                                                                                                                                                   CAGCGGTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGACTTCGGCCTGCGCCCCGTACTATGAACGCGGGGGCTACTACCGTTCGGACTACTACTCCACCGACCGCTATGTGGCGCCGGGGTATT     >  1:164860/1‑150                                                                                                                                                     GCGGTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGACTTCGGCCTGCGCCCCGTACTATGAACGCGGGGGCTACTACCGTTCGGACTACTACTCCACCGACCGCTATGT                   >  1:986316/1‑134                                                                                                                                                     GCGGTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGACTTCGGCCTGCGCCCCGTACTATGAACGCGGGGGCTACTACCGTTCGGACTACTACTCCACCGACCGCTATGT                   <  2:986316/134‑1                                                                                                                                                      CGGTCCAGGAGGCTGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGACTTCGTCCTTGGCCCCGTACTATGAACGCGGGGGCTACTACCGTTCGGACTACTACTCCACCGACCGCTATGTGGCGCCGGGGTATTACC  <  1:1005951/150‑1                                                                                                                                                        GTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGACTTCGGCCTGCGCCCCGTACTATGAACGCGGGGGCTACTACCGTTCGGACTACTACTCCACCGACCGCTATGTGGCGCCGGGGTATTACC  <  1:433190/148‑1                                                                                                                                                        GTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGACTTCGGCCTGCGCCCCGTACTATGAACGCGGGGGCTACTACCGTTCGGACTACTACTCCACCGACCGCTATGTGGCGCCGGGGTATTACC  >  2:433190/1‑148                                                                                                                                                                                                                                                                                                             CATAGCGGTCGGTGGAGTAGTAGTCCGAACGGTAGTAGCCCCCGCGTTCATAGTACGGGGCGCAGGCCGAAGTCATCAGCCCCAGCAGGGCGATCAACAGGATTCGATAGGACATGGCGGCCTCCTGGACCGCTGGAGTGCCCGAACAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1610633‑1610482 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcggTCCAGGAGGCCGCCATGTCCTATCGAATCCTGTTGATCGCCCTGCTGGGGCTGATGACTTCGGCCTGCGCCCCGTACTATGAACGCGGGGGCTACTACCGTTCGGACTACTACTCCACCGACCGCTATGTGGCGCCGGGGTATTACC  >  NC_002947/1610505‑1610651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.