New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1631125 = | 80 (1.100) | 6 (0.090) | 6/228 | NT | 8.0% | intergenic (+17/‑164) | PP_1430/lepA | DegP‑like serine endoprotease/elongation factor 4 |
? | NC_002947 | 1631149 = | 64 (0.950) | intergenic (+41/‑140) | PP_1430/lepA | DegP‑like serine endoprotease/elongation factor 4 |
AACACTCGAAAAGGCTGCGAGCCGGACGCCCGCCGAAAAATAGCCGGGAATTGTACCTTAAGCTGCTGGGTTATGGGAGATTCCTCTGTCCGACTGTACACAGCAATCATTCCGGCAATTGTGAAGATTCATGAAAAAGGGCAGCCGAAGCTGCCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1631283‑1631125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccctttTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTTGACCCGTGAGTG > NC_002947/1631149‑1631295 AACACTCGAAAAGGCTGCGAGCCGGACGCCCGCCGAAAAATAGCCGGGAATTGTACCTTAAGCTGCTGGGTTATGGGAGATTCCTCTGTCCGACTGTACACAGCAATCATTCCGGCAATTGTGAAGATTCATGAAAAAGGGCAGCCGAAG > 1:495478/1‑150 AAAGGCTGCGAGCCGGACGCCCGCCGAAAAATAGCCGGGAATTGTACCTTAAGCTGCTGGGTTATGGGAGATTCCTCTGTCCGACTGTACACAGCAATCATTCCGGCAATTGTGAAGATTCATGAAAAAGGGCAGCCGAAGCTGCCCTTT < 2:1760683/150‑1 GGGTTATGGGAGATTCCTCTGTCCGACTGTACACAGCAATCATTCCGGCAATTGTGAAGATTCATGAAAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTC > 1:1316654/1‑105 GGGTTATGGGAGATTCCTCTGTCCGACTGTACACAGCAATCATTCCGGCAATTGTGAAGATTCATGAAAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTC < 2:1316654/105‑1 TCTGTCCGACTGTACACAGCAATCATTCCGGCAATTGTGAAGATTCATGAAAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGA < 1:864561/100‑1 TCTGTCCGACTGTACACAGCAATCATTCCGGCAATTGTGAAGATTCATGAAAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGA > 2:864561/1‑100 GGCAATTGTGAAGATTCATGAAAAAGGGCAGCTTCGGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGC > 2:357065/1‑150 AAAGGGCAGCCGAAGCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTT > 1:322619/1‑150 GCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTTGACCC > 1:1323172/1‑150 GCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTTGACCC < 1:1620579/150‑1 GCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGA > 1:865068/1‑140 GCTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGA < 2:865068/140‑1 CTGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTTGACCCG > 2:1094178/1‑150 TGCCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTTGACCCGT < 2:1230502/150‑1 CCCTTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTTGACCCGTGA < 1:1094178/150‑1 TTTTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTTGACCCGTGAGTG > 2:1316859/1‑150 AACACTCGAAAAGGCTGCGAGCCGGACGCCCGCCGAAAAATAGCCGGGAATTGTACCTTAAGCTGCTGGGTTATGGGAGATTCCTCTGTCCGACTGTACACAGCAATCATTCCGGCAATTGTGAAGATTCATGAAAAAGGGCAGCCGAAGCTGCCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1631283‑1631125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccctttTTCATGAATCTTCACAATTGCCGGAATGATTGCTGTGTACAGTCGGACAGAGGAATCTCCCATAACCCAGCAGCTTAAGGTACAATTCCCGGCTATTTTTCGGCGGGCGTCCGGCTCGCAGCCTTTTCGAGTGTTGACCCGTGAGTG > NC_002947/1631149‑1631295 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |