| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1640490 | 61 (0.840) | 4 (0.060) | 4/232 | NT | 6.3% | coding (503/957 nt) | cmoB | tRNA 5‑methoxyuridine(34) synthase CmoB |
| ? | NC_002947 | = 1640514 | 61 (0.890) | coding (479/957 nt) | cmoB | tRNA 5‑methoxyuridine(34) synthase CmoB | |||||
CACCAGCTCGCCACCTTTGACCAGGCAGTCCTTGAGCGCCAGCAGGTGCTCGATGGGCGAGCGGCGGTGATAGAACACGCCCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1640336‑1640490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccgTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGTTCGCCCTGGAAGACCTGCCCGCCAACCTGGAAGGTTTCGATACCGTGTTTTCCATGGGCGTGTTCTATCACCGCCGCTCGCCCATCGAGCACCTGCTGGCGCTCAAG < NC_002947/1640514‑1640366 CACCAGCTCGCCACCTTTGACCAGGCAGTCCTTGAGCGCCAGCAGGTGCTCGATGGGCGAGCGGCGGTGATAGAACACGCCCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCA > 2:1737718/1‑150CACCAGCCCGCCACCGTTGACCAGGCACTCCTTGAGCGGCAGCAGTTGCGCGAGGGGCTAGCGGCGGTGATAGAACACTCCCATGGAAAACACGGTATCGAAACCTTCCATTTTGTCGGGCAGGTTTTCCAGGGCTAACGGCAGGTGCCA < 2:1365823/150‑1 ACCAGCTCGCCACCTTTGACCAGGCAGTCCTTGAGCGCCAGCAGGTGCTCGATGGGCGAGCGGCGGTGATAGAACACGCCCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGATCATCCAGGGCGAACCGCCGGTGACAa > 1:1365823/1‑149 CCAGCTCGCCACCTTTGACCAGGCAGTCCTTGAGCGCCAGCAGGTGCTCGATGGGCGAGCGGCGGTGATAGAACACGCCCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGG > 2:806156/1‑150 CAGCTCGCCACCTTTGACCAGGCAGTCCTTGAGCGCCAGCAGGTGATAGCTGCAAGAGCGGCGGTGATAGAACACGCCCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGGC > 2:1927815/1‑150 AGTCCTTGAGCGCCAGCAGGTGCTCGATGGGCGAGCGGCGGTGATAGAACACGCCCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAG > 1:344387/1‑125 AGTCCTTGAGCGCCAGCAGGTGCTCGATGGGCGAGCGGCGGTGATAGAACACGCCCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAG < 2:344387/125‑1 CCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGGCCGTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGTTCGCCATGGAAGAC < 2:940413/131‑1 CCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGGCCGTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGTTCGCCATGGAAGAC > 1:940413/1‑131 GGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGGCCGTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGT < 2:83770/104‑1 GGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGGCCGTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGT > 1:83770/1‑104 TCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGGCC > 1:1425665/1‑57 TCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGGCC < 2:1425665/57‑1 AGGCCGTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGTTCGCCCTGGAAGACCTGCCCGCCAACCTGGAAGGTTACGATACCGTGTTTTCCATGGGCGTGTTCTATCACCGCCGCTCGCCCATCGAGCACCTGCTGGCGC > 2:120291/1‑150 GCCGTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGTTCGCCCTGGAAGACCTGCCCGCCATCCAGGAAGGTTTCGATACCGTGTTTTTCATGGGCGTGTTCTATCACCGCCGCTCGCCCATCGAGCCCCTGCTGGCGCTC > 1:627972/1‑150 GTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGTTCGCCCTGGAAGACCTGCCCGCCAACCTGGAAGGTTTCGATACCGTGTTTTCCATGGGCGTGTTCTATCACCGCCGCTCGCCCATCGAGCACCTGCTGGCGCTCAAG < 1:691697/150‑1 GTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGTTCGCCCTGGAAGACCTGCCCGCCAACCTGGAAGGTTTCGATACCGTGTTTTCCATGGGCGTGTTCTATCACCGCCGCTCGCCCATCGAGCACCTGCTGGCGCTCAAG < 1:464868/150‑1 GTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGTTCGCCCTGGAAGACCTGCCCGCCAACCTGGAAGGTTTCGATACCGTGTTTTCCATGGGCGTGTTCTATCACCGCCGCTCGCCCATCGAGCACCTGCTGGCGCTCAAG < 1:409721/150‑1 CACCAGCTCGCCACCTTTGACCAGGCAGTCCTTGAGCGCCAGCAGGTGCTCGATGGGCGAGCGGCGGTGATAGAACACGCCCATGGAAAACACGGTATCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGGGCGAACGGCAGGTGCCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1640336‑1640490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccgTGCAGCAATACCTGCCGGAGTTGCCGGCCTGGCACCTGCCGTTCGCCCTGGAAGACCTGCCCGCCAACCTGGAAGGTTTCGATACCGTGTTTTCCATGGGCGTGTTCTATCACCGCCGCTCGCCCATCGAGCACCTGCTGGCGCTCAAG < NC_002947/1640514‑1640366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |