| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1642089 = | 59 (0.810) | 4 (0.060) | 4/240 | NT | 6.6% | coding (126/393 nt) | PP_1442 | hypothetical protein |
| ? | NC_002947 | 1642134 = | 57 (0.810) | coding (81/393 nt) | PP_1442 | hypothetical protein | |||||
CCTGGACGCCGAAAGCGAATGCCCCAAGCGCCTGCAGGTCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1642134‑1642089‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGC > NC_002947/1642134‑1642281 CCTGGACGCCGAAAGCGAATGCCCCAAGCGCCTGCAGGTCGGCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGAT > 1:1912892/1‑149CCTGGACGCCGAAAGCGAATGCCCCAAGCGCCTGCAGGTCGGCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGAT < 2:1912892/149‑1 CTGGACGCCGAAAGCGAATGCCCCAAGCGCCTGCAGGTCGGCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGA < 1:433775/107‑1 CTGGACGCCGAAAGCGAATGCCCCAAGCGCCTGCAGGTCGGCCAGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGA > 2:433775/1‑107 AGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGC > 1:1340851/1‑150 AGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGC < 1:683909/150‑1 AGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTG < 1:1097386/138‑1 AGGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTG > 2:1097386/1‑138 CCTGGACGCCGAAAGCGAATGCCCCAAGCGCCTGCAGGTCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1642134‑1642089‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagGTCAACGGGCTGCGAGGATTGTTGCGCGCAAGCAGAAAGCAGGGCGAAGCTCAGGGGAACGAGCAGACGAGGAGAGGTCATGGTGGCTCCGAAGGCTGGCGATGGCCTGAGGATACCCGATGATCGAGGAAATTTGTGCTGCCTGTGC > NC_002947/1642134‑1642281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |