New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1674838	67 (0.920)	4 (0.060)	4/240	NT	5.6%	intergenic (+46/‑38)	dsbC/hom	thiol:disulfide interchange protein DsbC/homoserine dehydrogenase
	?	NC_002947	= 1674854	69 (0.980)					intergenic (+62/‑22)	dsbC/hom	thiol:disulfide interchange protein DsbC/homoserine dehydrogenase

AGTCGATCGGGGTCAACGGCACGCCGGCCATTGTTCTTGAAAGCGGCCAGGTCATTCCGGGCTACCAGCCGGCACCACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1674686‑1674838 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggCCGACACGTTTGCCGACCGTGAAACTTGCC  <  NC_002947/1674854‑1674825                                                                                                                                                                                         tcTCGATCGGGGTCAACGGCACGCCGGCCATTGTTCTTGAAAGCGGCCCGGTAAGTCCTTGCTACCAGCCGGCACCACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCA                                   <  2:461508/148‑1   TCGATCGGGGTCAACGGCACGCCGGCCATTGTTCTTGAAAGCGGCCAGGTCATTCCGGGCTACCAGCCGGCACCACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCACG                                 <  1:1411675/150‑1   TCGATCGGGGTCAACGGCACGCCGGCCATTGTTCTTGAAAGCGGCCAGGTCATTCCGGGCTACCAGCCGGCACCACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCACG                                 >  2:1379799/1‑150     GATCGGGGTCAACGGCACGCCGGCCCTTGTTCTTGAAAGCGGCCAGGTCATTCCGGGCTACCAGCCGGCACCACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCACaga                               >  1:461508/1‑147                                         AAGCGGCCAGGTCATTCCGGGCTACCAGCCGGCACCACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCACGGCCGACACGTTTGCCGACCGTGAAACTTGCC  <  1:1217455/143‑1                                         AAGCGGCCAGGTCATTCCGGGCTACCAGCCGGCACCACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCACGGCCGACACGTTTGCCGACCGTGAAACTTGCC  >  2:1217455/1‑143                                                                            CACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCACGGCCGACACGTTTGCCGACCGTGAAAC       <  1:1610340/103‑1                                                                            CACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCACGGCCGACACGTTTGCCGACCGTGAAAC       >  2:1610340/1‑103                                                                                                                                                                                         AGTCGATCGGGGTCAACGGCACGCCGGCCATTGTTCTTGAAAGCGGCCAGGTCATTCCGGGCTACCAGCCGGCACCACAGGTCGCCAAGCTGGCACTTGCCAAGTAATCCAGTTCAGTACGCCGTCGTCATGGGGTGACGGCAAGTTTCACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1674686‑1674838 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggCCGACACGTTTGCCGACCGTGAAACTTGCC  <  NC_002947/1674854‑1674825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.