| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1680241 | 73 (1.000) | 4 (0.060) | 4/232 | NT | 5.2% | coding (602/1200 nt) | PP_1475 | CAIB/BAIF family protein |
| ? | NC_002947 | = 1680252 | 77 (1.130) | coding (591/1200 nt) | PP_1475 | CAIB/BAIF family protein | |||||
GCCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATGGAGGAGGGCGTGATGCCCGGCATGATGTTGCCGGTGCGTTCGCGGATGAAACCGAACACATCGAATTCCGGCACCATGCTCTCCATCATGGCAAAGATCGCCTCGTACAGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1680087‑1680241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggccaGGTGGTGGACGTGGCCCTGTACGAGGCGATCTTTGCCATGATGGAGAGCATGGTGCCGGAATTCGATGTGTTCGGTTTCATCCGCGAACGCACCGGCAACATCATGCCGGGCATCACGCCCTCCTCCATCCACACAAGCGCCGA < NC_002947/1680252‑1680109 GCCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATGGAGGAGGGCGTGATGCCCGGCATGATGTTGCCGGTGCGTTCGCGGATGAAACCGAACACATCGAATTCCGGCACCATGCTCTCCATCACGGCAAAGATCGCCTCGTACAG > 1:834430/1‑150GCCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATGGAGGAGGGCGTGATGCCCGGCATGATGTTGCCGGTGCGTTCGCGGATGAAACCGAACACATCGAATTCAGACCCCATGATCTTCGTGTAGGCAAAGAGCGTCGCCTACAG > 2:1383307/1‑150 CCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATGGAGGAGGGCGTGATGCCCGGCATGATGTTGCCGGTGCGTTCGCGGATGAAACCGAACACATCGAATTCCGGCACCATGCTCTCCATCATGGCAAAGATCGCCTCGTACAGG < 1:1383307/150‑1 TGCCCGGCATGATGTTGCCGGTGCGTTCGCGGATGAAACCGAACACATCGAATTCCGGCACCATGCTCTCCATCATGGCAAAGATCGCCTCGTACAGGGCCAGGTGGTGGACGTGGCCCTGTACGAGG < 1:1031399/128‑1 TGCCCGGCATGATGTTGCCGGTGCGTTCGCGGATGAAACCGAACACATCGAATTCCGGCACCATGCTCTCCATCATGGCAAAGATCGCCTCGTACAGGGCCAGGTGGTGGACGTGGCCCTGTACGAGG > 2:1031399/1‑128 GAAACCGAACACATCGAATTCCGGCACCATGCTCTCCATCATGGCAAAGATCGCCTCGTACAG < 1:388310/63‑1 GAAACCGAACACATCGAATTCCGGCACCATGCTCTCCATCATGGCAAAGATCGCCTCGTACAG > 2:388310/1‑63 ATGGCAAAGATCGCCTCGTACAGGGCCACGTCCACCACCTGGCCCTGTACGAGGCGATCTTTGCCATGATGGAGAGCATGGTGCCGGAATTCGATGTGTTCGGT > 1:987091/1‑104 ATGGCAAAGATCGCCTCGTACAGGGCCACGTCCACCACCTGGCCCTGTACGAGGCGATCTTTGCCATGATGGAGAGCATGGTGCCGGAATTCGATGTGTTCGGT < 2:987091/104‑1 CAGGGCCAGGTGGTGGACGTGGCCCTGTACGAGGCGATCTTTGCCATGATGGAGAGCATGGTGCCGGAATTCGATGTGTTCGGTTTCATCCGCGAACGCACCGGCAACATCATGCCGGGCATCACGCCCTCCTCCATCCACACAAGCGCC < 1:888535/150‑1 GGGCCAGGTGGTGGACGTGGCCCTGTACGAGGCGATCTTTGCCATGATGGAGAGCATGGTGCCGGAATTCGATGTGTTCGGTTTCATCCGCGAACGCACCGGCAACATCATGCCGGGCATCACGCCCTCCTCCATCCACACAAGCGCCGA < 2:368443/150‑1 GCCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATGGAGGAGGGCGTGATGCCCGGCATGATGTTGCCGGTGCGTTCGCGGATGAAACCGAACACATCGAATTCCGGCACCATGCTCTCCATCATGGCAAAGATCGCCTCGTACAGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1680087‑1680241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggccaGGTGGTGGACGTGGCCCTGTACGAGGCGATCTTTGCCATGATGGAGAGCATGGTGCCGGAATTCGATGTGTTCGGTTTCATCCGCGAACGCACCGGCAACATCATGCCGGGCATCACGCCCTCCTCCATCCACACAAGCGCCGA < NC_002947/1680252‑1680109 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |