| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1715393 = | 72 (0.990) | 5 (0.070) | 5/240 | NT | 7.2% | coding (297/831 nt) | PP_1510 | carboxyvinyl‑carboxyphosphonate phosphorylmutase |
| ? | NC_002947 | 1715428 = | 59 (0.840) | coding (332/831 nt) | PP_1510 | carboxyvinyl‑carboxyphosphonate phosphorylmutase | |||||
CGGGAATGGCAGGCTTCGCGCAGCCTGCACAGCGGCGCGCACGCGCTCCACAGCCAAGCCGAAGTCATAGATGGGCGCATCACTGCGGCCACTGGCATCTTCGATGGAGCCGCCCACCAGGCCAATTTCGGCGGCACGCAGAATGGTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1715543‑1715393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCT > NC_002947/1715428‑1715575 CGGGAATGGCAGGCTTCGCGCAGCCTGCACAGCGGCGCGCACGCGCTCCACAGCCAAGCCGAAGTGATAGCTGGGCGAATCACTGCGGCCACTGGCATCTTCGATGGAGCCGCCCACCAGGCCAATTTCGGCGGCACGCAGAATGGTCTG < 2:242354/150‑1CGGGAATGGCAGGCTTCGCGCAGCCTGCACAGCGGCGCGCACGCGCTCCACAGCCAAGCCGAAGTCATAGATGGGCGCATCACTGCGGCCACTGGCATCTTCGATGGAGCCGCCCACCAGGCCAATTTCGGCGGCACGCAGAATGGTCTG < 2:1175388/150‑1 GGGAATGGCAGGCTTCGCGCAGCCCGCACAGCGGCGCGCACGCGCTCCACAGCCAAGCCGAAGTCATAGATGGGCGCATCACTGCGGCCACTGGCATCTTCGATGGAGCCGCCCACCAGGCCAATTTCGGCGGCACGCAGAATGGTCTGG > 1:333045/1‑150 CACCAGGCCAATTTCGGCGGCACGCAGAATGGTCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTC > 2:1912593/1‑150 ACCAGGCCAATTTCGGCGGCACGCAGAATGGTCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCC > 2:766044/1‑150 GCCAATTTCGGCGGCACGCAGAATGGTCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTC < 1:766044/150‑1 CAATTTCGGCGGCACGCAGAATGGTCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGTGCCCATCTATGACTTCGGCTTGG > 1:1748382/1‑92 CAATTTCGGCGGCACGCAGAATGGTCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGTGCCCATCTATGACTTCGGCTTGG < 2:1748382/92‑1 GGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCT < 1:52909/150‑1 CGGGAATGGCAGGCTTCGCGCAGCCTGCACAGCGGCGCGCACGCGCTCCACAGCCAAGCCGAAGTCATAGATGGGCGCATCACTGCGGCCACTGGCATCTTCGATGGAGCCGCCCACCAGGCCAATTTCGGCGGCACGCAGAATGGTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1715543‑1715393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCT > NC_002947/1715428‑1715575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |