New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1756192 | 56 (0.770) | 8 (0.110) | 7/242 | NT | 12.5% | coding (109/369 nt) | PP_1561 | holin |
? | NC_002947 | = 1756223 | 57 (0.800) | coding (140/369 nt) | PP_1561 | holin |
CTCTGACGAACTTCCTCGCACGCACTATCTGGACGGCTCGCCATGCCGCTGAGACCACAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1756042‑1756192 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaCGGCCTGACCCCTTACGTGTGGCCCAGGCCTTGGCCTGTTCGGCAGCTAGGTCGGCATGACCATCGCAGTAGCCATTGGCATTGCGGTGCAGCGATCGGCAGCCCTGTGCCCGGCATGGTCGTTGTGGTCTCAGCGGCATGGCGAGCC < NC_002947/1756223‑1756076 CTCTGACGAACTTCCTCGCACGCACTATCTGGACGGCTCGCCATGCCGCTGAGACCACAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCC < 1:1346373/150‑1 TCTGACGAACTTCCTCGCACGCACTATCTGGACGGCTCGCCATGCCGCTGAGACCACAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGAAAGACCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACCGGCCA > 1:910410/1‑150 TATCTGGACGGCCCGCCATGCCGCTGAGACCACAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCAAGGCCTGACCCCTTACGTGTGGCC < 1:1540128/150‑1 GGCTCGCCATGCCGCTGAGACCACAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACC‑AGCTGCCGAACAGGC < 1:1624295/114‑1 GGCTCGCCATGCCGCTGAGACCACAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACC‑AGCTGCCGAACAGGC > 2:1624295/1‑114 GCTCGCCATGCCGCTGAGACCACAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCACGGCCTGACCCCTTACGTGTGGCCCAGGCCTTGG < 1:1743511/150‑1 TGCCGCTGAGACCATAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCACGGCCTGACCCCTTACGTGTGGCCCAGGCCTTGG < 1:653291/142‑1 TGCCGCTGAGACCATAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCACGGCCTGACCCCTTACGTGTGGCCCAGGCCTTGG > 2:653291/1‑142 CATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCACGGCCTGACCCCTTACGTGTGGCCCAGGCCTTG < 2:718458/120‑1 CATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCACGGCCTGACCCCTTACGTGTGGCCCAGGCCTTG > 1:718458/1‑120 CGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCACGGCCTGACCCCTTACGTGTGGCCCAGGCC > 1:1774373/1‑112 CGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCACGGCCTGACCCCTTACGTGTGGCCCAGGCC < 2:1774373/112‑1 CGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCC < 2:996521/81‑1 CGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCC > 1:996521/1‑81 CACGGCCTGACCCCTTACGTGTGGCCCAGGCCTTGGCCTGTTCGGCAGCTAGGTCGGCATGACCATCGCAGTAGCCATTGGCATTGCGGTGCAGCGATCGGCAGCCCTGTGCCCGGCATGGTCGTTGTGGTCTCAGCGGCATGGCGAGCC > 1:1445198/1‑150 CACGGCCTGACCCCTTACGTGTGGCCCAGGCCTTGGCCTGTTCGGCAGCTAGGTCGGCATGACCATCGCAGTAGCCATTGGCATTGCGGTGCAGCGATCGGCAGCCCTGTGCCCGGCATGGTCGTT < 2:1660596/126‑1 CACGGCCTGACCCCTTACGTGTGGCCCAGGCCTTGGCCTGTTCGGCAGCTAGGTCGGCATGACCATCGCAGTAGCCATTGGCATTGCGGTGCAGCGATCGGCAGCCCTGTGCCCGGCATGGTCGTT > 1:1660596/1‑126 CTCTGACGAACTTCCTCGCACGCACTATCTGGACGGCTCGCCATGCCGCTGAGACCACAACGACCATGCCGGGCACAGGGCTGCCGATCGCTGCACCGCAATGCCAATGGCTACTGCGATGGTCATGCCGACCTAGCTGCCGAACAGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1756042‑1756192 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaCGGCCTGACCCCTTACGTGTGGCCCAGGCCTTGGCCTGTTCGGCAGCTAGGTCGGCATGACCATCGCAGTAGCCATTGGCATTGCGGTGCAGCGATCGGCAGCCCTGTGCCCGGCATGGTCGTTGTGGTCTCAGCGGCATGGCGAGCC < NC_002947/1756223‑1756076 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |