| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1764304 = | 51 (0.700) | 4 (0.060) | 4/234 | NT | 6.9% | coding (170/735 nt) | PP_1573 | major tail protein |
| ? | NC_002947 | 1764361 = | 60 (0.870) | coding (227/735 nt) | PP_1573 | major tail protein | |||||
TGGGTTTAATGCCCTTGCCGTCAGACCAACCGACCACCCAACGAATGCTCTCGATGGTGTCGTCTTCCGAGATCTGATGAAGGCGCACGTGCGAGGCGTTGCGTGGGTCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1764459‑1764304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacgcaACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGACCAATGGC > NC_002947/1764361‑1764506 TGGGTTTAATGCCCTTGCCGTCAGACCAACCGACCACCCAACGAATGCTCTCGATGGTGTCGTCTTCCGAGATCTGATGAAGGCGCACGTGCGAGGCGTTGCGTGGGTCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGC > 2:1672252/1‑150TGGGTTTAATGCCCTTGCCGTCAGACCAACCGACCACCCAACGAATGCTCTCGATGGTGTCGTCTTCCGAGATCTGATGAAGGCGCACGTGCGAGGCGTTGCGTGGGTCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGC > 2:1672135/1‑150 GGTTTAATGCCCTTGCCGTCAGACCAACCGACCACCCAACGAATGCTCTCGATGGTGTCGTCTTCCGAGATCTGATGAAGGCGCACGTGCGAGGCGTTGCGTGGGTCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCA < 1:205077/150‑1 CTGATGAAGGCGCACGTGCGAGGCGTTGCGTGGGTCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGC < 2:191158/77‑1 CTGATGAAGGCGCACGTGCGAGGCGTTGCGTGGGTCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGC > 1:191158/1‑77 AGGCGTTGCGTGGGTCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGG > 2:245818/1‑150 GCGTTGCGTGGGTCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGC > 2:583644/1‑150 TCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACA < 1:583644/150‑1 GGGGTGCGAAGGCCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATT < 1:245818/150‑1 CCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGACCAAT > 1:1085290/1‑150 CCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGACCAAT > 1:1880522/1‑150 CCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGACCAAT > 1:1840657/1‑150 CCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGACCAAT > 2:402600/1‑150 CCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGAC > 2:1212260/1‑146 CCACGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGAC < 1:1212260/146‑1 CGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGACCAATGGC < 2:1880522/150‑1 CGCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGACCAATGGC < 1:1617973/150‑1 GCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAA > 2:161976/1‑137 GCAACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAA < 1:161976/137‑1 TGGGTTTAATGCCCTTGCCGTCAGACCAACCGACCACCCAACGAATGCTCTCGATGGTGTCGTCTTCCGAGATCTGATGAAGGCGCACGTGCGAGGCGTTGCGTGGGTCGACGTTGAGGGTCAGCGAAGCCTGGCCCGGGGTGCGAAGGCCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1764459‑1764304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacgcaACGCCTCGCACGTGCGCCTTCATCAGATCTCGGAAGACGACACCATCGAGAGCATTCGTTGGGTGGTCGGTTGGTCTGACGGCAAGGGCATTAAACCCACAGTCGGCGTCGCCGGCGCGCTGGCGGCCATTGAACTGACCAATGGC > NC_002947/1764361‑1764506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |