New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1768617 = | 81 (1.110) | 4 (0.060) | 4/238 | NT | 5.1% | coding (176/480 nt) | PP_1578 | hypothetical protein |
? | NC_002947 | 1768641 = | 70 (1.000) | coding (200/480 nt) | PP_1578 | hypothetical protein |
AGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1768650‑1768617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaCCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTGCACCGGCCCATGCCCCGCACCGC > NC_002947/1768641‑1768789 AGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTC > 1:1142828/1‑90 AGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTC < 2:1142828/90‑1 TGCCGTCGTCGTTGCGCGCCGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTC < 1:1545048/77‑1 TGCCGTCGTCGTTGCGCGCCGGCACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTC > 2:1545048/1‑77 ACCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTAGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTGCACCGGCCCATGCCCCGCACCGC > 2:1263204/1‑150 AGATCCTGGGTGCCGTCGTCGTTGCGCGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1768650‑1768617 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaCCCAGGATCTGACCTTCGCGCTAAGCAACATCGACGGCATCGCCTCTGGCTTCGTCCGCGCAGCGCTCCGGGATGGGCGTCGAATGTCGCTGGTCTACCGCGCCTACACCTCCGACGACCTCGGTGCACCGGCCCATGCCCCGCACCGC > NC_002947/1768641‑1768789 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |