| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1838723 | 82 (1.120) | 5 (0.070) | 5/230 | NT | 5.6% | coding (488/606 nt) | PP_1644 | NAD(P)H dehydrogenase |
| ? | NC_002947 | = 1838742 | 92 (1.360) | coding (469/606 nt) | PP_1644 | NAD(P)H dehydrogenase | |||||
GTACCAGCCATTGGACCGGCGGCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1838567‑1838723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggtggcGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAAGG < NC_002947/1838742‑1838594 GTACCAGCCATTGGACCGGCGGCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCAGCGCCTGCG > 1:1573316/1‑150GTACCAGCCATTGGACCGGCGGCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGAACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCG < 2:321237/150‑1 TACCAGCCATTGGACCGGCGGCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCAGCGCCTGCGT < 2:1573316/150‑1 CCAGCCATTGGACCGGCGGCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGG > 2:689890/1‑150 CAGCCATTGGACCGGCGGCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGCGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGT > 2:1668318/1‑150 AGCCATTGGACCGGCGGCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTG > 2:1700613/1‑150 GGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCCAC < 2:125489/150‑1 CCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGCA < 1:931590/145‑1 CCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGCA > 2:931590/1‑145 TTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCAC < 1:214730/121‑1 TTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCAC > 2:214730/1‑121 cTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTG > 2:1817538/2‑80 cTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTG < 1:1817538/79‑1 GCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGG < 2:908262/78‑1 GCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGG > 1:908262/1‑78 CGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAA < 1:1542770/150‑1 GTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAG < 1:1528941/150‑1 GTGGCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAG < 2:989301/143‑1 GTGGCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAG > 1:989301/1‑143 GTGGCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGAGGGAGAGTGGCTAGACAGCCC > 2:1564771/1‑150 GGCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAA < 2:1046486/150‑1 GCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGCGGCGGCGCGTGGCTAGAAAGCCCAAG > 2:146132/1‑150 GCGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAAG < 1:962228/150‑1 CGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAAGG < 1:1140930/150‑1 GTACCAGCCATTGGACCGGCGGCAATGCCTTGGGCTTTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1838567‑1838723‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggtggcGGCACGCCTTATGGCGCCAGCCACCACGCAGGCGCCGATGGCAAGCGCGAACTCGACCCACACGAAATCGCCCTGTGCCGCGCCCTGGGCCAACGCCTGGCGACCACGGCCAAGGCCCTGGAGGCGGCGCGTGGCTAGAAAGCCCAAGG < NC_002947/1838742‑1838594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |