New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1958834	65 (0.890)	6 (0.090)	6/238	NT	8.6%	coding (273/1395 nt)	fumC‑II	class 2 fumarate hydratase
	?	NC_002947	= 1958860	65 (0.930)					coding (247/1395 nt)	fumC‑II	class 2 fumarate hydratase

GAAGCAGTCGTTGGAGCTCTGCGAGCGGTTGACGTGGTCATTGGGGTGTACTGGCGCCTTGCCGCCACGGCCTTTGCCGGCCAGTTCGTTGGCGCGTCCGGCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1958681‑1958834 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAGGCCGTGGCGGCAAGGCGCCAGTACACCCCAATGACCACG  <  NC_002947/1958860‑1958713                                                                                                                                                                                                                                                                                                                 GAAGCAGTCGTTGGAGCTCTGCGAGCGGTTGACGTGGTCATTGGGGTGTACTGGCGCCTTGCCGCCACGGCCTTTGCCGGCCAGTTCGTTGGCGCGTCCGGCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTG                                                                                                                                                           >  2:846074/1‑150    GCAGTCGTTGGAGCTCTGCGAGCGGTTGACGTGGTCATTGGGGTGTACTGGCGCCTTGCCGCCACGGCCTTTGCCGGCCAGTTCGTTGGCGCGTCCGGCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCA                                                                                                                                                        <  1:91040/150‑1                            GTTGACGTGGTCATTGGGGTGTACTGGCGCCTTGCCGCCACGGCCTTTGCCGGCCAGTTCGTTGGCGCGTCCGGCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAG‑ACGACGATCAGTTCCCGCTCGTC                                                                                                                               <  2:130106/150‑1                                      TCATTGGGGTGTACTGGCGCCTTGCCGCCACGGCCTTTGCCGGCCAGTTCGTTGGCGCGTCCGGCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAG                                                                                                                     >  2:659801/1‑150                                                                                        GTTGGCGCGTCCGGCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGG                                                                                                                 >  1:1788775/1‑104                                                                                        GTTGGCGCGTCCGGCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGG                                                                                                                 <  2:1788775/104‑1                                                                                                                           TGTTGCTTTGGGTGCCACTGCCCGTCTGCCAG‑ACGACGAGCGGGAACTGATCGTCGTGCTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAGGCCGTGGCG                                >  1:659801/1‑150                                                                                                                                 TTTGGGTGCCACTGCCCGTCTGCCAG‑ACGACGAGCGGGAACTGATCGTCGT‑CTGGCAGACGGACAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAGGCCGTGGCGGCAAGGC                         >  2:447455/1‑150                                                                                                                                                       CCAGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAGGCCGTGGCGGCAAGGCGCCAGTACACCCCAATGACCA    <  2:470942/150‑1                                                                                                                                                       CCAGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAG                                         <  1:648177/113‑1                                                                                                                                                       CCAGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAG                                         >  2:648177/1‑113                                                                                                                                                        CAGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAGGCCGTGGCGGCAAGGCGCCAGTACACCCCAATGACCAC   <  1:734654/150‑1                                                                                                                                                        CAGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAGGCCGTGGCGGCAAGGC                         >  1:388726/1‑128                                                                                                                                                        CAGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAGGCCGTGGCGGCAAGGC                         <  2:388726/128‑1                                                                                                                                                         AGCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAGGCCGTGGCGGCAAGGCGCCAGTACACCCCAATGACCACG  >  2:1598240/1‑150                                                                                                                                                                                                                                                                                                                 GAAGCAGTCGTTGGAGCTCTGCGAGCGGTTGACGTGGTCATTGGGGTGTACTGGCGCCTTGCCGCCACGGCCTTTGCCGGCCAGTTCGTTGGCGCGTCCGGCGATCACCTCGTTGACGTTCATGTTGCTTTGGGTGCCACTGCCCGTCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1958681‑1958834 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagCACGACGATCAGTTCCCGCTCGTCGT‑CTGGCAGACGGGCAGTGGCACCCAAAGCAACATGAACGTCAACGAGGTGATCGCCGGACGCGCCAACGAACTGGCCGGCAAAGGCCGTGGCGGCAAGGCGCCAGTACACCCCAATGACCACG  <  NC_002947/1958860‑1958713

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.