| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1963683 | 86 (1.180) | 6 (0.080) | 6/244 | NT | 6.4% | intergenic (+70/‑149) | PP_1760/yegE | ABC transporter ATP‑binding protein/phosphodiesterase domain‑containing diguanylate cyclase |
| ? | NC_002947 | = 1963711 | 90 (1.250) | intergenic (+98/‑121) | PP_1760/yegE | ABC transporter ATP‑binding protein/phosphodiesterase domain‑containing diguanylate cyclase | |||||
ATTATCTGGCTGCCTTCACCGGGCTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGTGCGACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1963613‑1963683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGTCGCACCAGCTTTTAGAAATTGAGCAAGACAGTTGCTCCCAAAAGCCCGGTGAAGGCAGCCAGATAATCAGCTCTGCTGCAGATGCCCATACAGCTTGGCGTATAACCCACCCTCGGC < NC_002947/1963711‑1963563 ATTATCTGGCTGCCTTCACCGGGCTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGTGCGACCCCGTGTTCGCGGGCAAGCCCGCTC < 1:1822451/94‑1ATTATCTGGCTGCCTTCACCGGGCTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGTGCGACCCCGTGTTCGCGGGCAAGCCCGCTC > 2:1822451/1‑94 TTCACCGGGCTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGTGCGACCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGTCGCACCAGCTTTTAGAAAT < 1:393167/108‑1 TTCACCGGGCTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGTGCGACCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGTCGCACCAGCTTTTAGAAAT > 2:393167/1‑108 CCGGGCTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGTGCGACCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGTCGCACCAGC > 1:485661/1‑94 CCGGGCTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGTGCGACCCCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGTCGCACCAGC < 2:485661/94‑1 CCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGTCGCACCAGCTTTTAGAAATTGAGCAAGACAGTTGCTCCCAAAAGCCCGGTGAAGGCAGCCAGATAATCAGCTCTGCTGCAGATGCCCATACAGCTTGGCGTATAACCCACCCTCGGC > 1:1916794/1‑150 ATTATCTGGCTGCCTTCACCGGGCTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGTGCGACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1963613‑1963683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGTGTTCGCGGGCAAGCCCGCTCCCACAGGGTCGCACCAGCTTTTAGAAATTGAGCAAGACAGTTGCTCCCAAAAGCCCGGTGAAGGCAGCCAGATAATCAGCTCTGCTGCAGATGCCCATACAGCTTGGCGTATAACCCACCCTCGGC < NC_002947/1963711‑1963563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |