New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2066905 = | 58 (0.790) | 4 (0.060) | 4/244 | NT | 5.9% | coding (412/972 nt) | PP_1843 | Mg(2+)/Co(2+) transporter |
? | NC_002947 | 2066964 = | 70 (0.970) | coding (353/972 nt) | PP_1843 | Mg(2+)/Co(2+) transporter |
GTGCGCCACGAAGGCAAGCTGGAATTCATCGAAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2067055‑2066905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agGATTTGGAGTGGCCGTTGCGGCAGGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCAGCTTGCCTTCGTGGCGCACTGGCGAATAGGTGACGATGAACAACGCGTCACCGAAGGTTTCCAGCTTGGGCCGGC > NC_002947/2066964‑2067111 GTGCGCCACGAAGGCAAGCTGGAATTCATCGAAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGAA < 2:1881051/150‑1 TGGAATTCATCGAAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGAA > 1:994631/1‑131 TGGAATTCATCGAAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGAA < 2:994631/131‑1 CATCGAAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGTAGGATTTGGAGTGGCCGTTGCGGCAGG < 2:1053194/150‑1 CACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGAAGGATTTGGAGTGGCCGTTGCGGCAGGTGATGATGTAGCCGTTGCCCGCGAAGATATG > 1:1421552/1‑126 CACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGAAGGATTTGGAGTGGCCGTTGCGGCAGGTGATGATGTAGCCGTTGCCCGCGAAGATATG < 2:1421552/126‑1 TACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGAAGGATTTGGAGTGGCCGTTGCGGCAGGTGATGATGTAGCCGTTGCCCGAGAAGATATGGGTTTCGATGAATTCCAGCTTGGCTTCGTGGCGCAC > 1:900763/1‑150 AGGATGTGAAGTGGCCGTTGCGGCAGGTGCTGTTGCTGCCGGTGCTTGGCAACATATGGGGTTCGATGAATTCCAGCTTGCCTTCGTGGCGCACTGGCGAATAGGTGACGATGAACAACGCGTCACCGAAGGGTTCCAGCTTGGGCCGGC < 2:991554/150‑1 GTGCGCCACGAAGGCAAGCTGGAATTCATCGAAACCCATATCTTCGCGGGCAACGGCTACATCATCACCTGCCGCAACGGCCACTCCAAATCCTACGCCATGGTCCGCCAGCGCTGCGAGGCTCGGCCGCTGCTGCTGGAACATGGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2067055‑2066905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agGATTTGGAGTGGCCGTTGCGGCAGGTGATGATGTAGCCGTTGCCCGCGAAGATATGGGTTTCGATGAATTCCAGCTTGCCTTCGTGGCGCACTGGCGAATAGGTGACGATGAACAACGCGTCACCGAAGGTTTCCAGCTTGGGCCGGC > NC_002947/2066964‑2067111 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |