New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2086714	NA (NA)	3 (0.040)	3/238	NT	NA	coding (786/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2086737	NA (NA)					coding (809/1302 nt)	PP_1865	transposase

ACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2086561‑2086714 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC  <  NC_002947/2086737‑2086589                                                                                                                                                                                                                                                                                                                 ACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  1:1163872/1‑150 ACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  2:971876/1‑150 ACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  2:1763366/1‑150 ACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           <  2:1738936/150‑1 ACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  2:1105779/1‑150 ACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  1:970415/1‑150 ACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGAGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  2:57374/1‑150  CGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTG                                                                                                                                                          <  1:149755/150‑1  CGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTG                                                                                                                                                          <  2:1357717/150‑1   GCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGA                                                                                                                                                         <  1:1466147/150‑1   GCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGA                                                                                                                                                         >  1:1813619/1‑150   GCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGA                                                                                                                                                         >  2:1852246/1‑150    CTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGAT                                                                                                                                                        <  1:1673435/150‑1    CTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGAT                                                                                                                                                        >  2:1599669/1‑150     TTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGGGGGCACCGCTGGCGACGTGTCGAGTTACCGATTGATTCACCAAACGACTCAGGTGATAACAGCTTGATG                                                                                                                                                       >  1:432660/1‑150     TTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATG                                                                                                                                                       >  2:373665/1‑150         TCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCATCATTCACCAAACGACCAAGGTCATAACAGCTTGAagtgct                                                                                                                                                   >  2:600994/1‑144                             GCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  1:1280082/1‑122                             GCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           <  2:1280082/122‑1                                CCGATGCCCGTCGCCGCAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGAT                                                                                                                                                        >  1:441478/1‑122                                CCGATGCCCGTCGCCGCAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGAT                                                                                                                                                        <  2:441478/122‑1                                       CCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGT                                                                                                                     <  1:1542034/150‑1                                             CCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           <  2:1723323/106‑1                                             CCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  1:1723323/1‑106                                               ACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           <  1:1134865/104‑1                                               ACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  2:1134865/1‑104                                                            GCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAA                                                                                                                          <  1:745064/124‑1                                                            GCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAA                                                                                                                          >  2:745064/1‑124                                                                       ATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTG                                                                                                                                                          >  2:1280367/1‑81                                                                       ATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTG                                                                                                                                                          <  1:1280367/81‑1                                                                                                             GTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           <  1:1870825/42‑1                                                                                                             GTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTT                                                                                                                                                           >  2:1870825/1‑42                                                                                                                                                      TGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCG      <  1:163667/150‑1                                                                                                                                                      TGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCG      >  1:1852246/1‑150                                                                                                                                                      TGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCG      <  1:46074/150‑1                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT    >  1:1599669/1‑150                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT    >  2:637699/1‑150                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT    >  1:1823142/1‑150                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT    <  2:552988/150‑1                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT    >  2:1078810/1‑150                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT    <  1:1938640/150‑1                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT    <  1:724146/150‑1                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCA                              >  2:711509/1‑124                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCA                              <  1:711509/124‑1                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGAT                                        <  1:488975/114‑1                                                                                                                                                        ATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGAT                                        >  2:488975/1‑114                                                                                                                                                        ATGCTCTCGGCCATGTTGCTCCAGAACATCAATCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGT    <  2:802031/150‑1                                                                                                                                                         TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG   >  1:971876/1‑150                                                                                                                                                         TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTG   <  2:539736/150‑1                                                                                                                                                         TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACA                            <  1:604839/125‑1                                                                                                                                                         TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACA                            >  2:604839/1‑125                                                                                                                                                         TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCAC                                                                                                               <  2:469532/42‑1                                                                                                                                                         TGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCAC                                                                                                               >  1:469532/1‑42                                                                                                                                                          GCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC  >  2:388343/1‑150                                                                                                                                                          GCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC  <  2:360706/150‑1                                                                                                                                                          GCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTAGCCAGCGGTGCCCGCTTTTTACTTCGATGGATTTCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC  <  1:726108/150‑1                                                                                                                                                                                                                                                                                                                 ACGCTTGATCCAGGAAGGTGAGTGGCAAGCACCGATGCCCGTCGCCACAGGCACTGTGCGCGAGCAATCCATCGAAGTAAAAGGCGGGCACCGCTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2086561‑2086714 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGGGCATCGGTGC  <  NC_002947/2086737‑2086589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.