New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2102968 =	58 (0.790)	7 (0.100)	5/236	NT	11.6%	noncoding (40/76 nt)	PP_t22	tRNA‑Glu
	?	NC_002947	2242257 =	52 (0.750)					noncoding (33/76 nt)	PP_t30	tRNA‑Glu

CACCACCACTGCACCGCATAGACGCCACAGTATTTAAACTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2103122‑2102968 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCA  >  NC_002947/2242257‑2242401                                                                                                                                                                                                                                                                                                              CACCACCACTGCACCGCATAGACGCCACAGTATTTAAACTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTA                                                                                                                                                        >  2:1223169/1‑150  ACCACCACTGCACCGCATAGACGCCACAGTATTTAAACTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTAC                                                                                                                                                       >  2:590773/1‑150    CACCACTGCACCGCATAGACGCCACAGTATTTAAACTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTACCG                                                                                                                                                     >  2:478984/1‑150     ACCACTGCACCGCATAGACGCCACAGTATTTAAACTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTACCGC                                                                                                                                                    >  1:426254/1‑150     ACCACTGCACCGCATAGACGCCACAGTATTTAAACTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTACCGC                                                                                                                                                    >  2:357765/1‑150                                                               CTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCA‑TTGGCGTCCCCTAGGGGACTCGAACCCCTGTCACCGCCCTTTCACGGCGGTAACAGG                                                                                                                                >  1:1744154/1‑111                                                               CTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCA‑TTGGCGTCCCCTAGGGGACTCGAACCCCTGTCACCGCCCTTTCACGGCGGTAACAGG                                                                                                                                <  2:1744154/111‑1                                                                       CCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTACCGCCCTTTCACGGCGGTAACAGGGGT                                                                                                                             >  1:262364/1‑107                                                                       CCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTACCGCCCTTTCACGGCGGTAACAGGGGT                                                                                                                             <  2:262364/107‑1                                                                                                             TTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTACCGCCCTTTCACGGCGGTAACAGGGG                                                                                                                              >  1:791895/1‑68                                                                                                             TTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTACCGCCCTTTCACGGCGGTAACAGGGG                                                                                                                              <  2:791895/68‑1                                                                                                                                           GAACCCCTGTTACCGCCGTGAAAGGGCGGTGACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGA              >  1:650984/1‑150                                                                                                                                                       CCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCA  <  1:849138/150‑1                                                                                                                                                        CGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCC                                   <  1:926231/116‑1                                                                                                                                                        CGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCC                                   >  2:926231/1‑116                                                                                                                                                           CCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTC                                                                     >  1:61578/1‑79                                                                                                                                                           CCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTC                                                                     <  2:61578/79‑1                                                                                                                                                                                                                                                                                                              CACCACCACTGCACCGCATAGACGCCACAGTATTTAAACTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCATTTGGCGTCCCCTAGGGGACTCGAACCCCTGTTACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2103122‑2102968 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACGTTTACCCGCGTTTTGCGGGACTTTAAAGGCTCATTCGCTTATTGAATGGGCCTTTTGTTTTTTCCCTTCTCAATAATTTTCCCCCGACAAACGGCCGCA  >  NC_002947/2242257‑2242401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.