| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2137856 | 52 (0.710) | 5 (0.070) | 5/232 | NT | 9.0% | intergenic (+49/‑85) | gstB/yadG | glutathione S‑transferase/ABC transporter ATP‑binding protein |
| ? | NC_002947 | = 2137870 | 53 (0.780) | intergenic (+63/‑71) | gstB/yadG | glutathione S‑transferase/ABC transporter ATP‑binding protein | |||||
TTCGAACTGCCCATCGAGCGCCCGGACATGTACCACCTTCAAGCCTGGTATGAACGCCTTAAGCAACGCCCGGCCTACCAGGCCGCCGTGATGACCGCGCTCACTTGAACCTGCTTCGATAGTCATTATCAATAGATGTGACTGTACTTGTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2137700‑2137856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagccATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTCACATCTATTGATAATGACTATCGAAGCAGGTTCAAGTGAGCGCGGTCATCACGGCGGCCTGGTAGGCCGGGCGTTGCTTAAGGCGTTCATACCAGGCTTGAAGGTGGTACATGTCC < NC_002947/2137870‑2137723 TTCGAACTGACCATCGAGCGCCCGGACATGTACCACCTTCAAGCCTGGTATGAACGCCTTAAGCAACGCCCGGCCTACCAGGCCGCCGTGATGACCGCGCTCACTTGAACCTGCTTCGATAGTCATTATCAATAGATGTGACTGTACTTG > 1:536815/1‑150 GAACTGCCCATCGAGCGCCCGGACATGTACCACCTTCAAGCCTGGTATGAACGCCTTAAGCAACGCCCGGCCTACCAGGCCGCCGTGATGACCGCGCTCACTTGAACCTGCTTCGATAGTCATTATCAATAGATGTGACTGTACTTGTGC > 2:376022/1‑150 AACTGCCCATCGAGCGCCCGGACATGTACCACCTTCAAGCCTGGTATGAACGCCTTAAGCAACGCCCGGCCTACCAGGCCGCCGTGATGACCGCGCTCACTTGAACCTGCTTCGATAGTCATTATCAATAGATGTGACTGTACTTGTGCA > 1:1252146/1‑150 TTAAGCAACGCCCGGCCTACCAGGCCGCCGTGATGACCGCGCTCACTTGAACCTGCTTCGATAGTCATTATCAATAGATGTGACTGTACTTGTGCAGCCATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTCACAT > 1:1211214/1‑135 TTAAGCAACGCCCGGCCTACCAGGCCGCCGTGATGACCGCGCTCACTTGAACCTGCTTCGATAGTCATTATCAATAGATGTGACTGTACTTGTGCAGCCATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTCACAT < 2:1211214/135‑1 GACCGCGCTCACTTGAACCTGCTTCGATAGTCATTATCAATAGATGTGACTGTACTTGTGCAGCCATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTC > 1:850847/1‑97 GACCGCGCTCACTTGAACCTGCTTCGATAGTCATTATCAATAGATGTGACTGTACTTGTGCAGCCATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTC < 2:850847/97‑1 TTCGATAGTCATTATCAATAGATGTGACTGTACTTGTGCAGCC‑TGGCCTTGCA‑‑‑CCATGGCTGCACAAGTACAGTCACATCTATTGATAATGACTATCGAAGCAGGTTCAAGTGAGCGCGGTCATCACGGCGGCCTGGTAGGCCGGGCGTT > 1:1363025/1‑150 GTGCAGCCATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTCACATCTATTGATAATGACTATCGAAGCAGGTTCAAGTGAGCGCGGTCATCACGGCGGCCTGGTAGGCCGGGCGTTGCTTAAGGCGTTCATACCAGGCTTGAAGGTGGTAC > 1:1015255/1‑150 AGCCATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTCACATCTATTGATAATGACTATCGAAGCAGGTTCAAGTGAGCG < 1:1673148/78‑1 AGCCATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTCACATCTATTGATAATGACTATCGAAGCAGGTTCAAGTGAGCG > 2:1673148/1‑78 CCATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTCACATCTATTGATAACTACTATCGAAGCAGGTTCAAGTGAGCGCGGTCATCACGGCGGCCTGATCAGCTTCGCGTTGCTTAAGGCGTTCATACCAGGCTTGAAGGTGGTACATGTCC < 1:1020295/150‑1 TTCGAACTGCCCATCGAGCGCCCGGACATGTACCACCTTCAAGCCTGGTATGAACGCCTTAAGCAACGCCCGGCCTACCAGGCCGCCGTGATGACCGCGCTCACTTGAACCTGCTTCGATAGTCATTATCAATAGATGTGACTGTACTTGTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2137700‑2137856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcagccATGG‑‑‑TGCAAGGCCA‑GGCTGCACAAGTACAGTCACATCTATTGATAATGACTATCGAAGCAGGTTCAAGTGAGCGCGGTCATCACGGCGGCCTGGTAGGCCGGGCGTTGCTTAAGGCGTTCATACCAGGCTTGAAGGTGGTACATGTCC < NC_002947/2137870‑2137723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |