New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2158904 =	57 (0.780)	8 (0.120)	7/228	NT	13.3%	intergenic (+30/‑158)	acpP/fabF	acyl carrier protein/beta‑ketoacyl‑ACP synthase II
	?	NC_002947	2158937 =	52 (0.780)					intergenic (+63/‑125)	acpP/fabF	acyl carrier protein/beta‑ketoacyl‑ACP synthase II

AGTACTCTCCTTTTCTAATAACAGAGTCTCTTGCCATTGCATTCAAGTGCTGGAATGAAATGGCAACAGGCTCTTGGTGCGCGGTGAACGAAGCCGCCTGAAAAATGCGAGGCGCTCGCAAAGAAAAAACCGCAC‑GCCAGCGAAGGCAGTGCGGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2159061‑2158904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcggttttTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGT  >  NC_002947/2158937‑2159084                                                                                                                                                                                                                                                                                                                     AGTACTCTCCTTTTCTAATAACAGAGTCTCTTGCCATTGCATTCAAGTGCTGGAATGAAATGGCAACAGGCTCTTGGTGCGCGGTGAACGAAGCCGCCTGAAAAATGCGAGGCGCTCGCAAAGAAAAAACCGCAC‑GCCAGCGAAGGCAGT                                                                                                                                                              >  2:1026479/1‑150   TACTCTCCTTTTCTAATAACAGAGTCTCTTGCCATTGCATTCAAGTGCTGGAATGAAATGGCAACAGGCTCTTGGTGCGCGGTGAACGAAGCCGCCTGAAAAATGCGAGGCGCTCGCAAAGAAAAAACCGCAC‑GCCAGCGAAGGCAGTGC                                                                                                                                                            >  1:1868945/1‑150        TCCTTTTCTAATAACAGAGTCTCTTGCCATTGCATTCAAGTGCTGGAATGAAATGGCAACAGGCTCTTGGTGCGCGGTGAACGAAGCCGCCTGAAAAATGCGAGGCGCTCGCAAAGAAAAAACCGCAC‑GCCAGCGAAGGCAGTGCGGTTT                                                                                                                                                       >  2:1775123/1‑150                                                            ATGGCAACAGGCTCTTGGTGCGCGGTGAACGAAGCCGCCTGAAAAATGCGAGGCGCTCGCAAAGAAAAAACCGCACTGCCTTCGCTGGC‑GTGCGGTTTTTTCTTT                                                                                                                                                >  1:772066/1‑105                                                            ATGGCAACAGGCTCTTGGTGCGCGGTGAACGAAGCCGCCTGAAAAATGCGAGGCGCTCGCAAAGAAAAAACCGCACTGCCTTCGCTGGC‑GTGCGGTTTTTTCTTT                                                                                                                                                <  2:772066/105‑1                                                                                                                        AAAGAAAAAACCGCAC‑GCCAGCGAAGACAGAGCGGTTGTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGCTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCTAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAG                                       >  1:1821441/1‑150                                                                                                                             AAAAACCGCAC‑GCCAGCGAAGGCAGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTT                                                                     <  1:1572515/115‑1                                                                                                                             AAAAACCGCAC‑GCCAGCGAAGGCAGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTT                                                                     >  2:1572515/1‑115                                                                                                                               AAACCGCAC‑GCCAGCGAAGGCAGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGA                                <  2:1821441/150‑1                                                                                                                                AACCGCAC‑GCCAGCGAAGGCAGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAG                               >  1:230781/1‑150                                                                                                                                              CGAAGGCAGTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGC                  <  2:230781/150‑1                                                                                                                                                      GTGCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGC          <  2:928541/150‑1                                                                                                                                                        GCGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGT        >  1:1369788/1‑150                                                                                                                                                         CGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTC       >  2:394611/1‑150                                                                                                                                                         CGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGA                              <  2:1257770/127‑1                                                                                                                                                         CGGTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGA                              >  1:1257770/1‑127                                                                                                                                                           GTTTTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGT     <  2:329806/150‑1                                                                                                                                                            TTTTTTCTTTTCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACTATGGGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTATAAAAGTAGAGTACTGTGTCGAGTAGACGCGTCGTG    >  2:171533/1‑150                                                                                                                                                              TTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTCGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGT  <  2:1120444/150‑1                                                                                                                                                              TTTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGT  <  1:1193/150‑1                                                                                                                                                                                                                                                                                                                     AGTACTCTCCTTTTCTAATAACAGAGTCTCTTGCCATTGCATTCAAGTGCTGGAATGAAATGGCAACAGGCTCTTGGTGCGCGGTGAACGAAGCCGCCTGAAAAATGCGAGGCGCTCGCAAAGAAAAAACCGCAC‑GCCAGCGAAGGCAGTGCGGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2159061‑2158904 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcggttttTTCTTTGCGAGCGCCTCGCATTTTTCAGGCGGCTTCGTTCACCGCGCACCAAGAGCCTGTTGCCATTTCATTCCAGCACTTGAATGCAATGGCAAGAGACTCTGTTATTAGAAAAGGAGAGTACTGTGTCGCGTAGACGCGTCGTGGT  >  NC_002947/2158937‑2159084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.