| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2166742 = | 82 (1.120) | 4 (0.060) | 4/232 | NT | 5.2% | intergenic (‑543/‑238) | PP_5483/PP_1921 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 2166761 = | 68 (1.000) | intergenic (‑562/‑219) | PP_5483/PP_1921 | hypothetical protein/hypothetical protein | |||||
CCCGTCGTGCGCATAGTCATAGTAGCAAAATAACACCAACCCTCCTCTCTCCTGCTTCGCTCGACAGAATCTGCACCCGCGCCGACTCTCCCTGCCCCTACTCCCTACTCCCTACTCCCTACTCCCTACGACCTGCAACCTGGAAGCCAGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2166895‑2166742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggttgCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTTGCTACTATGACTATGCGCACGACGGGCGGTCAGAAGCCGT > NC_002947/2166761‑2166909 CCCGTCGTGCGCATAGTCATAGTAGCAAAATAACACCAACCCTCCTCTCTCCTGCTTCGCTCGACAGAATCTGCACCCGCGCCGACTCTCCCTGCCCCTACTCCCTACTCCCTACTCCCTACTCCCTACGACCTGCAACCTGGAAGCCAG < 1:1433603/150‑1CCCGTCGTGCGCATAGTCATAGTAGCAAAATAACACCAACCCTCCTCTCTCCTGCTTCGCTCGACAGAATCTGCACCCGCGCCGACTCTCCCTGCCCCTACTCCCTACTCCCTACTCCCTACTCCCTACGACCTGCAACCTGGAAGCCAG > 1:687587/1‑150 CCGCGCCGACTCTCCCTGCCCCTACTCCCTACTCCCTACTCCCTACTCCCTACGACCTGCAACCTGGCTTCCAGGTTGCAGGTCGTAG < 1:227270/88‑1 CCGCGCCGACTCTCCCTGCCCCTACTCCCTACTCCCTACTCCCTACTCCCTACGACCTGCAACCTGGCTTCCAGGTTGCAGGTCGTAG > 2:227270/1‑88 CTGCCCCTACTCCCTACTCCCTACTCCCTACTCCCTACGACCTGCAACCTGGAAGCCAGGT > 1:1144340/1‑61 CTGCCCCTACTCCCTACTCCCTACTCCCTACTCCCTACGACCTGCAACCTGGAAGCCAGGT < 2:1144340/61‑1 CAACCTGGAAGCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGG < 1:14783/51‑1 CAACCTGGAAGCCAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGG > 2:14783/1‑51 CAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTTGCTACTATGACTATGCGCACGACGGGCG > 1:607192/1‑144 CAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTTGCTACTATGACTATGCGCACGACGGGCG < 2:607192/144‑1 CAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTT < 2:666572/116‑1 CAGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTT > 1:666572/1‑116 AGGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTTGCTACTATGACTATGCGCACGACGGGCGGTCAGAA < 1:1164770/150‑1 GGTTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTTGCTACTATGACTATGCGCACGACGGGCGGTCAGAAG > 2:724301/1‑150 TTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTTGCTACTATGACTATGCGCACGACGGGCGGTCAGAAGCC < 2:1433603/150‑1 TTGCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCACGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTTGCTACTATGACTATGCGCACGACGGGCGGTCAGAAGCC > 2:1701596/1‑150 GCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTTGCTACTATGACTATGCGCACGACGGGCGGTCAGAAGCCGT < 1:268925/150‑1 CCCGTCGTGCGCATAGTCATAGTAGCAAAATAACACCAACCCTCCTCTCTCCTGCTTCGCTCGACAGAATCTGCACCCGCGCCGACTCTCCCTGCCCCTACTCCCTACTCCCTACTCCCTACTCCCTACGACCTGCAACCTGGAAGCCAGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2166895‑2166742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggttgCAGGTCGTAGGGAGTAGGGAGTAGGGAGTAGGGAGTAGGGGCAGGGAGAGTCGGCGCGGGTGCAGATTCTGTCGAGCGAAGCAGGAGAGAGGAGGGTTGGTGTTATTTTGCTACTATGACTATGCGCACGACGGGCGGTCAGAAGCCGT > NC_002947/2166761‑2166909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |