New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2245187 | 73 (1.000) | 6 (0.090) | 6/230 | NT | 7.8% | coding (690/972 nt) | dusC | tRNA‑dihydrouridine synthase DusC |
? | NC_002947 | = 2245219 | 75 (1.110) | coding (722/972 nt) | dusC | tRNA‑dihydrouridine synthase DusC |
CCAGCGCACTGGGAGTGGGTGGCGCGGGTACAGGATGTGGTCAAGGTGCCGGTGTTCGCCAATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATCGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2245032‑2245187 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgcccgTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGATACCAGCCCACGCCCGAGCATGATGTCTTCAGCGCCACTGACCTCGCGGCAACGCCGCCAGTCATCGACCGTCCAGATCTCACCATTGGCGAACACCGGCACCTTGAC < NC_002947/2245219‑2245071 CCAGCGCACTGGGAGTGGGTGGCGCGGGTACAGGATGTGGTCAAGGTGCCGGTGTTCGCCAATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATCG > 1:563698/1‑150 CACTGGGAGTGGGTGGCGCGGGTACAGGATGTGGTCAAGGTGCCGGTGTTCGCCAATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATCGCGCCCG < 1:1863310/150‑1 GCGCGGGTACAGGATGTGGTCAAGGTGCCGGTGTTCGCCAATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTGTCGCGCCCGTCCCGCGCCGCCGCA > 1:1734266/1‑150 TGTGGTCAAGGTGCCGGTGTTCGCCAATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATC > 1:1855392/1‑114 TGTGGTCAAGGTGCCGGTGTTCGCCAATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATC < 2:1855392/114‑1 GGTGTTCGCCAATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCTATAC > 1:728763/1‑150 TGTTCGCCAATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTGTCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGATACCA < 2:1734266/150‑1 AATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGG > 1:1213086/1‑131 AATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGG < 2:1213086/131‑1 ATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATCGCGCCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCTATACCAGCCCACGCCCGAGCATG < 2:728763/150‑1 CCCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGATACCAGCCCACGCCCGAGCATGATGTCTTCAGCGCCACTGACCTCGCGGCAACGGTGCCAGTCATCGACCGTCCAGATCTCACCATTGGCGAACACCGGCACCTT > 2:544096/1‑150 CCCGCCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGATACCAGCCCACGCCCGAGCATGATGTCTTCAGCGCCACTGACCTCGCGGCAACGCCGCCAGTCATCGACCGTCCAGATCTCACCATTGGCGAACACCGGCACCTT < 1:1686798/150‑1 CCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGATACCAGCCCACGCCCGAGCATGATGTCTTCAGCGCCACTGACCTCGCGGCAACGCCGCCAG < 1:7306/105‑1 CCGTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGATACCAGCCCACGCCCGAGCATGATGTCTTCAGCGCCACTGACCTCGCGGCAACGCCGCCAG > 2:7306/1‑105 GTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGATACCAGCCCACGCCCGAGCATGATGTCTTCAGCGCCACTGACCTCGCGGCAACGCCGCCAGTCATCGACCGTCCAGATCTCACCATTGGCGAACACCGGCACCTTGAC < 1:448054/150‑1 GTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGATACCAGCCCACGCCCGAGCATGATGTCTTCAGCGCCACTGACCTCGCGGCAACGCCGCCAGTCATCGACCGTCCAGATCTCACCATTGGCGAACACCGGCACCTTGAC > 2:644668/1‑150 CCAGCGCACTGGGAGTGGGTGGCGCGGGTACAGGATGTGGTCAAGGTGCCGGTGTTCGCCAATGGTGAGATCTGGACGGTCGATGACTGGCGGCGTTGCCGCGAGGTCAGTGGCGCTGAAGACATCATGCTCGGGCGTGGGCTGGTATCGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2245032‑2245187 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgcccgTCCCGCGCCGCCGCAATCTGCAGGCCCAGGTCCGGGCGCGATACCAGCCCACGCCCGAGCATGATGTCTTCAGCGCCACTGACCTCGCGGCAACGCCGCCAGTCATCGACCGTCCAGATCTCACCATTGGCGAACACCGGCACCTTGAC < NC_002947/2245219‑2245071 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |