New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2414801	56 (0.770)	5 (0.070)	5/242	NT	8.4%	intergenic (+300/‑45)	PP_2114/PP_2115	transposase/hypothetical protein
	?	NC_002947	= 2530737	NA (NA)					intergenic (+113/‑68)	PP_2218/PP_2219	transposase/hypothetical protein

CTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2414760‑2414801 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCCATCCCTTTCAAGGTCTTTTGGTTTTGGCGGCTTTGATGACCCG  <  NC_002947/2530737‑2530589                                                                                                                                                                                                 CTCCGGGGTCCCCTCACTCCGGCCTCGCTCCCGGCAGGACCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCCAT                                           >  2:1113653/1‑150            CCTCACTCCGGCCTTGCTCCCGGCAGGACCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAA                                                                <  1:332521/118‑1            CCTCACTCCGGCCTTGCTCCCGGCAGGACCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAA                                                                >  2:332521/1‑118                  TCCGGCCTTGCTCCCGGCAGGACCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGA                                                                                                                  >  1:918879/1‑62                  TCCGGCCTTGCTCCCGGCAGGACCGGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGA                                                                                                                  <  2:918879/62‑1                                          GGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGTTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAGGGGCCATGCCTTTCAAGGTCTGTTGGTTTGTGCGGCTTTGGTGACCCt  >  1:1479807/1‑149                                                                                                                                                                                                 CTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2414760‑2414801 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgGAGTGAGGGGACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCCATCCCTTTCAAGGTCTTTTGGTTTTGGCGGCTTTGATGACCCG  <  NC_002947/2530737‑2530589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.