| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2436654 = | 68 (0.930) | 4 (0.060) | 4/228 | NT | 6.1% | intergenic (+189/‑470) | PP_2134/fadB | transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
| ? | NC_002947 | 2436709 = | 61 (0.910) | intergenic (+244/‑415) | PP_2134/fadB | transposase/enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase | |||||
GGCTTATTGCTTTGCGCTTGCGCGAAGAGCCAAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2436809‑2436654‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgctttgCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGATCACT > NC_002947/2436709‑2436852 GGCTTATTGCTTTGCGCTTGCGCGAAGAGCCAAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCC > 2:1575677/1‑150 GCTTATTGCTTTGCGCTTGCGCGAAGAGCCAAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCG > 2:1082721/1‑150 CTTATTGCTTTGCGCTTGCGCGAAGAGCCAAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGC > 2:493162/1‑150 TTATTGCTTTGCGCTTGCGCGAAGAGCCAAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCT > 2:665264/1‑150 CCAAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGC < 1:1311033/120‑1 CCAAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGC > 2:1311033/1‑120 AAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTG < 2:942919/125‑1 AAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTG > 1:942919/1‑125 TGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTA > 1:1281475/1‑141 TGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTA < 2:1281475/141‑1 GCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCAAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAA < 2:398646/132‑1 GCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCAAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAA > 1:398646/1‑132 GCCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGATC > 1:1278984/1‑150 CCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGATCA < 1:771797/150‑1 CCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCC < 2:418535/109‑1 CCGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCC > 1:418535/1‑109 CGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTC < 1:72205/52‑1 CGCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTC > 2:72205/1‑52 GCTTTGCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGATCACT < 2:1278984/150‑1 GGCTTATTGCTTTGCGCTTGCGCGAAGAGCCAAGGCGACTACACTGGCACTTGCTTGAATGAATAACCCGGCCTGCCTGGCCTTTTCTGCGCAGCAGAACGCAAAGCGGCGACTTGGCACCCCACCCCTTCAGGGTTATGCCGAGCCGCCGCTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2436809‑2436654‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgctttgCGTTCTGCTGCGCAGAAAAGGCCAGGCAGGCCGGGTTATTCATTCAAGCAAGTGCCAGTGTAGTCGCCTTGGCTCTTCGCGCAAGCGCAAAGCAATAAGCCGATGCTTGTGGTCAATCGCTGACATGAATGACCGGCGATCACT > NC_002947/2436709‑2436852 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |