New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2503985 =	68 (0.930)	4 (0.060)	4/238	NT	5.5%	coding (69/318 nt)	PP_2197	hypothetical protein
	?	NC_002947	2504006 =	71 (1.010)					coding (90/318 nt)	PP_2197	hypothetical protein

TCCAGGGTGGGTGGGCGCTGGTACGGGTCGGTGGACGGGCCACGTACCGGTGGCGCAGCCGGCATGCTGCCTTGACGGCTGTTGGGGTTGGCCCGCTGGATCGGGCTGTTGTAAGGGTTGTTGTTGCCGGCAGCACGTTGC‑ACGGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2504134‑2503985 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcCGGCAACAACAACCCTTACAACAGCCCGATCCAGCGGGCCAACCCCAACAGCCGTCAAGGCAGCATGCCGGCTGCGCCACCGGTACGTGGCCCGTCCACCGACCCGTACCAGCGCCCACCCACCCTGGACAACCGCGGCATCGGTAA  >  NC_002947/2504006‑2504152                                                                                                                                                                                                                                                                                                            TCCAGGGTGGGTGGGCGCTGGTACGGGTCGGTGGACGGGCCACGTACCGGTGGCGCAGCCGGCATGCTGCCTTGACGGCTGTTGGGGTTGGCCCGCTGGATCGGGCTGTTGTAAGGGTTGTTGTTGCCGGCAGCACGTTGC‑ACGGGCTGC                                                                                                                                                     <  2:1811743/150‑1                                                       GCAGCCGGCATGCTGCCTTGACGGCTGTTGGGGTTGGCCCGCTGGATCGGGCTGTTGTAAGGGTTGTTGTTGCCGGCAGCCCGTGCA‑ACGTGCTGCCGGCAACAACAACCCTTACAACAGC                                                                                                                            >  1:1571970/1‑121                                                       GCAGCCGGCATGCTGCCTTGACGGCTGTTGGGGTTGGCCCGCTGGATCGGGCTGTTGTAAGGGTTGTTGTTGCCGGCAGCCCGTGCA‑ACGTGCTGCCGGCAACAACAACCCTTACAACAGC                                                                                                                            <  2:1571970/121‑1                                                             GGCATGCTGCCTTGACGGCTGTTGGGGTTGGCCCGCTGGATCGGGCTGTTGTAAGGGTTGTTGTTGCCGGCAGCCCGTGCA‑ACGTGCTGCCGGCAACAACAACCCTTACAACAGCC                                                                                                                           <  2:666515/116‑1                                                             GGCATGCTGCCTTGACGGCTGTTGGGGTTGGCCCGCTGGATCGGGCTGTTGTAAGGGTTGTTGTTGCCGGCAGCCCG‑TGCAACGTGCTGCCGGCAACAACAACCCTTACAACAGCC                                                                                                                           >  1:666515/1‑116                                                              GCATGCTGCCTTGACGGCTGTTGGGGTTGGCCCGCTGGATCGGGCTGTTGTAAGGGTTGTTGTTGCCGGCAGCACGTTGC‑ACGGGCTGC                                                                                                                                                     >  1:24864/1‑89                                                              GCATGCTGCCTTGACGGCTGTTGGGGTTGGCCCGCTGGATCGGGCTGTTGTAAGGGTTGTTGTTGCCGGCAGCACGTTGC‑ACGGGCTGC                                                                                                                                                     <  2:24864/89‑1                                                                                                                                                     TGCCGGCAACAACAACCCTTACAACAGCCCGATCCAGCGGGCCAACCCCAACAGCCGTCAAGGCAGCATGCCGGCTGCGCCACCGGTACGTGGCCCGTCCACCGACCCGTACCAGCGCCCACCCACCCTGGACCACCGCGGCATCGGTAA  >  1:255650/1‑150                                                                                                                                                                                                                                                                                                            TCCAGGGTGGGTGGGCGCTGGTACGGGTCGGTGGACGGGCCACGTACCGGTGGCGCAGCCGGCATGCTGCCTTGACGGCTGTTGGGGTTGGCCCGCTGGATCGGGCTGTTGTAAGGGTTGTTGTTGCCGGCAGCACGTTGC‑ACGGGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2504134‑2503985 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcCGGCAACAACAACCCTTACAACAGCCCGATCCAGCGGGCCAACCCCAACAGCCGTCAAGGCAGCATGCCGGCTGCGCCACCGGTACGTGGCCCGTCCACCGACCCGTACCAGCGCCCACCCACCCTGGACAACCGCGGCATCGGTAA  >  NC_002947/2504006‑2504152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.