New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2563319 =	60 (0.820)	6 (0.090)	6/236	NT	9.6%	coding (1014/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
	?	NC_002947	2563353 =	56 (0.810)					coding (1048/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase

AATGTCATTGCTCATGGGATGCTCCTTTCAGGGTTGCTGGAAACGGGCCGGGGACAGGCGCTCGGGCGCCACGCCCTGGCTGACAAGGCTGGCACACAACGGCTGGCCCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCC‑CGCTGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2563469‑2563319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacCTGCTACTGGGCCAGCCGTTGTGTGCCAGCCTTGTCAGCCAGGGCGTGGCGCCCGAGCGCCTGTCCCCGGCCCGTTTCCAGCAACCCTGAAAGGAGCATCCCATGAGCAATGACATTCA  >  NC_002947/2563353‑2563471                                                                                                                                                                                                                                                                                 aattTCATTGCTCATGGGATGCTCCTTTCAGGGTTGCTGGAAACGGGCCGGGGACAGGCGCTCGGGCGCCACGCCCTGGCTGACAAGGCTGGCACACAACGGCTGGCCCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCC‑CGCTGCCGA                                                                                                                          <  1:658469/146‑1              ATGGGATGCTCCTTTCAGGGTTGCTGGAAACGGGCCGGGGACAGGCGCTCGGGCGCCACGCCCTGGCTGACAAGGCTGGCACACAACGGCTGGCCCAGTAGCAGGTCGGCAG‑CGGGCGCCTCGCGCCTGGCCGCCGACCTGCTACTGGGC                                                                                                             <  2:1595634/150‑1                GGGATGCTCCTTTCAGGGTTGCTGGAAACGGGCCGGGGACAGGCGCTCGGGCGCCACGCCCTGGCTGACAAGGCTGGCACACAACGGCTGGCCCAGTAGCAGGTCGGCAG‑CGGGCGCCTCGCGCCTGGCCGCCGACCTGCTACTGGGCCA                                                                                                           <  2:1100386/150‑1                                                                                                            CCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCC‑CGCTGCCGACCTGCTACTGGGCCAGCCGTTGTGTGCCAGCCTTGTCAGCCAGGGCGTGGCGCCCGAGCGCCTGTCCCCGGCCCGTTTCCAGCAACCCTGAAAGGAGCATCCCATGA               <  1:1595634/150‑1                                                                                                                     GGTCGGCGGCCAGGCGCGAGGCGCC‑CGCTGCCGACCTGCTACTGGGCCAGCCGTTGTGTGCCAGCCTTGTCAGCCAGGGCGTGGCGCCCGAGCGCCTGTCCCCGGCCCGTTTCCAGCAACCCTGAAAGGAGCATCCCATGAGCAATGACA      >  2:950050/1‑150                                                                                                                      GTCGGCGGCCAGGCGCGAGGCGCC‑CGCTGCCGACTTGCTACTGGGCCAGCCGTTGTGTGCCAGCCTTGTCAGCCAGGGCGTGGCGCCCGAGCGCCTGTCCCCGGCCCGTTTCCAGCAACCCTGAAAGGAGCATCCCATGAGCAATGACAT     >  1:1055181/1‑150                                                                                                                         GGCGGCCAGGCGCGAGGCGCC‑CGCTGCCGACTTGCTACTGGGCCAGCCGTTGTGTGCCAGCCTTGTCAGCCAGGGCGTGGCGCCCGAGCGCCTGTCCCCGGCCCGTTTCCAGCAACCCTGAAAGGAGCATCCCATGAGCAATGACATTCA  <  2:1055181/150‑1                                                                                                                                                                                                                                                                                 AATGTCATTGCTCATGGGATGCTCCTTTCAGGGTTGCTGGAAACGGGCCGGGGACAGGCGCTCGGGCGCCACGCCCTGGCTGACAAGGCTGGCACACAACGGCTGGCCCAGTAGCAGGTCGGCGGCCAGGCGCGAGGCGCC‑CGCTGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2563469‑2563319 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacCTGCTACTGGGCCAGCCGTTGTGTGCCAGCCTTGTCAGCCAGGGCGTGGCGCCCGAGCGCCTGTCCCCGGCCCGTTTCCAGCAACCCTGAAAGGAGCATCCCATGAGCAATGACATTCA  >  NC_002947/2563353‑2563471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.