New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2628627 =	71 (0.970)	6 (0.090)	5/238	NT	8.4%	coding (246/642 nt)	clpP	ATP‑dependent Clp protease proteolytic subunit
	?	NC_002947	2628652 =	62 (0.890)					coding (271/642 nt)	clpP	ATP‑dependent Clp protease proteolytic subunit

TAGGCAGGCAATGACGCTTGCCCTTGGCACCTGCCGCCAGCAGGAAGGCGCCCATGCTGCAGGCCTGGCCGATGCAGATGGTCGAAACGTCCGGCTTGATGAACTGCATGGTGTCGTAGATCGACATGCC‑GGCGGTGACGGAACCGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2628778‑2628627 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcATGTCGATCTACGACACCATGCAGTTCATCAAGCCGGACGTTTCGACCATCTGCATCGGCCAGGCCTGCAGCATGGGCGCCTTCCTGCTGGCGGCAGGTGCCAAGGGCAAGCGTCATTGCCT  >  NC_002947/2628652‑2628773                                                                                                                                                                                                                                                                                     TAGGCAGGCAATGACGCTTGCCCTTGGCACCTGCCGCCAGCAGGAAGGCGACCATGCTGCAGGCCTGGCCGATGCAGATGGTCGAAACGTCCGGCTTGATGAACTGCATGGTGTCGTAGATCGACATGCC‑GGCGGTGACGGAACCGCCCG                                                                                                                              >  2:1927000/1‑150  AGGCAGGCAATGACGCTTGCCCTTGGCACCTGCCGCCAGCAGGAAGGCGCCCATGCTGCAGGCCTGGCCGATGCAGATGGTCGAAACGTCCGGCTTGATGAACTGCATGGTGTCGTAGATCGACATGCC‑GGCGGTGACGGAACCGCCCGG                                                                                                                             <  1:229944/150‑1                                     CCAGCAGGAAGGCGCCCATGCTGCAGGCCTGGCCGATGCAGATGGTCGAAACGTCCGGCTTGATGAACTGCATGGTGTCGTAGATCGACATGCCGGGCGGTTCCGTCACCG‑CCGGCATGTCGATCTACGACACCATGCAGTTCATCAAGC                                                                                          <  2:1608267/150‑1                                                                                             GGCTTGATGAACTGCATGGTGTCGTAGATCGACATGCC‑GGCGGTGACGGAACCGCC                                                                                                                                >  1:361034/1‑56                                                                                             GGCTTGATGAACTGCATGGTGTCGTAGATCGACATGCC‑GGCGGTGACGGAACCGCC                                                                                                                                <  2:361034/56‑1                                                                                                                            ACATGCC‑GGCGGTGACGGAACCGCCCGGCGAGTCGATCTACGACACCATGCAGTTCATCAAGCCGGACGTTTCGACCATCTGCATCGGCCAGGCCTGCAGCATGGGCGCCTTCCTGCTGGCGGCAGGTGCCAAGGGCAAGCGTCATTGCC   >  2:591021/1‑150                                                                                                                            ACATGCC‑GGCGGTGACGGAACCGCCCGGCATGTCGATCTACGACACCATGCAGTTCATCAAGCCGGACGTTTCGACCATCTGCATCGGCCAGGCCTGCAGCATGGGCGCCTTCCTGCTGGCGGCAGGTGCCAAGGGCAAGCGTCATTGCC   >  2:1511883/1‑150                                                                                                                             CATGCC‑GGCGGTGACGGAACCGCCCGGCATGTCGATCTACGACACCATGCAGTTCATCAAGCCGGACGTTTCGACCATCTGCATCGGCCAGGCCTGCAGCATGGGCGCCTTCCTGCTGGCGGCAGGTGCCAAGGGCAAGCGTCATTGCCT  <  1:1511883/150‑1                                                                                                                                  C‑GGCGGTGACGGAACCGCCCGGCATGTCGATCTACGACACCATGCAG                                                                                                    >  1:747238/1‑47                                                                                                                                  C‑GGCGGTGACGGAACCGCCCGGCATGTCGATCTACGACACCATGCAG                                                                                                    <  2:747238/47‑1                                                                                                                                                                                                                                                                                     TAGGCAGGCAATGACGCTTGCCCTTGGCACCTGCCGCCAGCAGGAAGGCGCCCATGCTGCAGGCCTGGCCGATGCAGATGGTCGAAACGTCCGGCTTGATGAACTGCATGGTGTCGTAGATCGACATGCC‑GGCGGTGACGGAACCGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2628778‑2628627 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcATGTCGATCTACGACACCATGCAGTTCATCAAGCCGGACGTTTCGACCATCTGCATCGGCCAGGCCTGCAGCATGGGCGCCTTCCTGCTGGCGGCAGGTGCCAAGGGCAAGCGTCATTGCCT  >  NC_002947/2628652‑2628773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.