New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2909065 =	74 (1.010)	4 (0.060)	4/230	NT	5.3%	coding (1416/1737 nt)	aprDA	alkaline protease secretion ABC transporter ATP‑binding protein
	?	NC_002947	2909101 =	75 (1.110)					coding (1380/1737 nt)	aprDA	alkaline protease secretion ABC transporter ATP‑binding protein

ACCATCGCCGAAAACATCGCCCGCTTTGCCGAGGTGGACAGCGACGCGGTGATCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2909220‑2909065 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggccagGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGG  >  NC_002947/2909101‑2909247                                                                                                                                                                                                                                                                                                                 ACCATCGCCGAAAACATCGCCCGCTTTGCCGAGGTGGACAGCGACGCGGTGATCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGC                                                                                                                                                           >  1:1649195/1‑150   CATCGCCGAAAACATCGCCCGCTTTGCCGAGGTGGACAGCGACGCGGTGATCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGG                                                                                                                                                         <  1:95498/150‑1                                                                                                           GTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGG                                                 >  2:755562/1‑150                                                                                                                   ACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTT                                         >  2:1421210/1‑150                                                                                                                     CCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTT                                       <  1:1421210/150‑1                                                                                                                           GGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACTGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGA                                 >  2:71439/1‑150                                                                                                                                                          CAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGG  >  1:167903/1‑150                                                                                                                                                          CAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGG  <  2:143545/150‑1                                                                                                                                                                                                                                                                                                                 ACCATCGCCGAAAACATCGCCCGCTTTGCCGAGGTGGACAGCGACGCGGTGATCCGTGCCGCCCGCAGCAGCGGTGTACACGACATGATCCTGCGCTTCCCGCAGGGTTACGACACCCGCCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2909220‑2909065 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggccagGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGG  >  NC_002947/2909101‑2909247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.