| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2957131 = | 58 (0.790) | 8 (0.120) | 8/230 | NT | 11.6% | intergenic (+43/‑153) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein |
| ? | NC_002947 | 2957186 = | 68 (1.010) | intergenic (+98/‑98) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein | |||||
TGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTAC‑CACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2957282‑2957131‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCT > NC_002947/2957186‑2957330 TGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTAC‑CACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGG < 1:256590/150‑1TGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAACTAAC‑CCTACACGAACATTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGG < 2:1507154/150‑1 CTTGCGCAAGTAACAGGTAC‑CACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGTCTTCGCCGGTGTTCGCGG > 1:286774/1‑119 CTTGCGCAAGTAACAGGTAC‑CACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGG < 2:286774/119‑1 CACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGA > 1:268870/1‑150 CCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCC < 2:268870/150‑1 CCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACA > 2:728409/1‑150 CGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGA < 1:1817342/144‑1 CGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGA > 2:1817342/1‑144 GCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAA > 1:926475/1‑150 ACGGTGGATGGCACCGGCTTCGCCGG‑ATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTC < 1:74473/146‑1 ACGGTGGATGGCACCGGCTTCGCCGG‑ATTCGCGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTC > 2:74473/1‑146 CGGGCATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCT > 1:1466426/1‑150 TGTACTCCAAACGACCGTCGTGGCGGTCCTTCTTGCGCAAGTAACAGGTAC‑CACACAGTCCGCAAGCACGCCGCACTCCCTCTGTGGGAGCGGGCATGCCCGCGAATCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2957282‑2957131‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcATGCCCGCTCCCACAGAGGGAGTGCGGCGTGCTTGCGGACTGTGTGGTACCTGTTACTTGCGCAAGAAGGACCGCCACGACGGTCGTTTGGAGTACAAATGTACACTCTCGAATTCTGGCAACAACGCGCCTCGGACCTCTACCT > NC_002947/2957186‑2957330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |