| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2958817 = | 45 (0.620) | 5 (0.080) | 12/216 | NT | 11.6% | intergenic (+40/+102) | PP_2589/PP_2590 | aldehyde dehydrogenase family protein/ferric siderophore receptor |
| ? | NC_002947 | 2958876 = | 37 (0.580) | intergenic (+99/+43) | PP_2589/PP_2590 | aldehyde dehydrogenase family protein/ferric siderophore receptor | |||||
CCAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2958979‑2958817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgggcGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGCGA > NC_002947/2958876‑2959022 CCAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACC > 2:984286/1‑150CCAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACC > 2:1178429/1‑150 GACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTCCAGTGAACTTCTAACCTGGTCCCGCCGCGTCGCCATATACGGCCTCTTCGCGGTCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGT < 2:707798/150‑1 GACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGT < 2:1850225/150‑1 CCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGG > 1:1766048/1‑150 GGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGAGC < 2:1065168/150‑1 TATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGT > 2:22480/1‑122 TATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGT < 1:22480/122‑1 ATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGA < 2:1113636/125‑1 ATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGGGA > 1:1113636/1‑125 ATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGT < 1:349053/121‑1 ATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGT > 2:349053/1‑121 TCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGG > 1:1867496/1‑122 TCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCTGTGG < 2:1867496/122‑1 TAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGT < 1:1175102/108‑1 TAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGT > 2:1175102/1‑108 TTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCACCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGT > 2:747068/1‑98 TTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCACCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGT < 1:747068/98‑1 TCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTTCAGCACAAGTCTGAGGGTTGTGCTGGACCT > 2:417054/1‑85 CCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGT < 1:1914998/47‑1 CCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGT > 2:1914998/1‑47 AGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGA > 1:417054/1‑85 AGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTG < 1:1065168/150‑1 GTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAA < 2:1852265/94‑1 GTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAA > 1:1852265/1‑94 CAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCA > 1:1446419/1‑150 GTGGGAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCA < 2:443939/150‑1 GGAGCGGGCGCGCCCGCTAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGC < 2:549557/92‑1 GGAGCGGGCGCGCCCGCTAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGC > 1:549557/1‑92 GAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTA > 2:1187690/1‑132 GAGCGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTA < 1:1187690/132‑1 CGGGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGC < 1:1679971/150‑1 GGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGCGA > 2:1267724/1‑150 GGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGCGA > 1:1830702/1‑150 GGCGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGCGA > 2:827827/1‑150 CCAGACCCTGGGGTTGGGGGCGCCGCGGACCTATCAGCTTTCGGCTAGCGTGGACTTCTAACCGGGTCCCGCCGCGGCGCCAGATACGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGTCCAGCACAACCCTCAGACTTGTGCTGAACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2958979‑2958817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgggcGCGCCCGCGAAGAGGCCGTATCTGGCGCCGCGGCGGGACCCGGTTAGAAGTCCACGCTAGCCGAAAGCTGATAGGTCCGCGGCGCCCCCAACCCCAGGGTCTGGGTCAGTGGCACACCCCAGTAGTCCTTGTCCCCCAGGTTGGCGA > NC_002947/2958876‑2959022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |