| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3339160 = | 87 (1.190) | 7 (0.120) | 7/204 | NT | 8.5% | intergenic (‑119/+124) | PP_2935/ybiT | membrane protein/ABC‑F family ATPase |
| ? | NC_002947 | 3339248 = | 80 (1.330) | intergenic (‑207/+36) | PP_2935/ybiT | membrane protein/ABC‑F family ATPase | |||||
GTACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3339327‑3339160‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcaagcccgcgaagagGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC > NC_002947/3339248‑3339396 GTACCTACGATTACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGCCGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGTGGGCTTGAGCGCTCACATAGGTAGCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGC < 1:37380/150‑1 TACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCG < 1:1813271/150‑1 TACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCG > 2:1560083/1‑150 TACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCA > 1:418372/1‑150 ACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAA < 2:698127/150‑1 GATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTTTGGGG‑CCTTGGGAGAGCGGttgagc > 1:172684/1‑144 ACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATTGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGTG‑TCTTGGGAGAGCGGGCAGTCCCGC > 2:140268/1‑150 TACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGA > 2:333046/1‑150 ATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAG < 2:160944/121‑1 ATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAG > 1:160944/1‑121 TTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAGG‑CCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTA > 2:1439432/1‑150 CCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGG‑‑‑‑‑‑‑‑‑‑‑GAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAG > 2:515140/1‑150 CGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGG > 2:82709/1‑135 CGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGG < 1:82709/135‑1 CCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGG < 2:375464/122‑1 CCACAGGGACCGCACAGGTATTGGACGCTTGTGGGGTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGG > 1:375464/1‑122 ACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAGG‑CCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAA < 1:1439432/150‑1 GAGCGGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGG > 1:462838/1‑150 GGGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAG < 2:1813271/150‑1 GGCAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGC < 2:59381/150‑1 CAAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGA < 1:48297/150‑1 AAGCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGAC > 1:1855076/1‑150 GCCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGA > 2:1027961/1‑150 CCCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGAC < 2:1111889/150‑1 CCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACA > 2:1320533/1‑150 CCGCGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACA > 1:1336995/1‑150 CGAAGAGGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGACGCGCGTGGCCAGCGACGACACGA < 1:1842395/150‑1 GGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCCAGTGTTTTTCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC < 1:1320533/150‑1 GTACCTACGATGACTACCTGCGTAGCCAGGGTGTGCTGGTCTGATTGATGGGACGGCCTGGCCATCTCGGATGGCCGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGGACCGCACAGGTATTGGACGCTTGTGGGG‑CCTTGGGAGAGCGGGCAAGCCCGCGAAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3339327‑3339160‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcaagcccgcgaagagGCCCGGCCATCCGAGATGGCCAGGCCGTCCCATCAATCAGACCAGCACACCCTGGCTACGCAGGTAGTCATCGTAGGTACCGCTGAAGTCCACCACACCATCGGCCGACAGCTCGATGATGCGCGTGGCCAGCGACGACACGAACTCGC > NC_002947/3339248‑3339396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |