| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3359983 = | 80 (1.100) | 8 (0.110) | 7/242 | NT | 9.9% | coding (1327/1581 nt) | PP_2956 | ribosomal protein S6 modification protein‑like protein |
| ? | NC_002947 | 3360015 = | 68 (0.950) | coding (1295/1581 nt) | PP_2956 | ribosomal protein S6 modification protein‑like protein | |||||
CACCGAATACGACTGGCGTATCGGCGTACTCAACGGTGAGGCGCTTTACGCCTGCCAGTACTTCATGTCCAAGGGCCACTGGCAAATCTACAACCACAAGGCCCAGGCCGGCGAAGTCAACGGCCTGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3360113‑3359983‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTGGGCCAGCAGCAGTACCGAGTGTTCGAACAGCTCC > NC_002947/3360015‑3360161 CACCGAATACGACTGGCGTATCGGCGTACTCAACGGTGAGGCGCTTTACGCCTGCCAGTACTTCATGTCCAAGGGCCACTGGCAAATCTACAACCACAAGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGT < 1:1355272/141‑1CACCGAATACGACTGGCGTATCGGCGTACTCAACGGTGAGGCGCTTTACGCCTGCCAGTACTTCATGTCCAAGGGCCACTGGCAAATCTACAACCACAAGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGTTGT > 2:1355272/1‑141 GCGTATCGGCGTACTCAACGGTGAGGCGCTTTACGCCTGCCAGTACTTCATGTCCAAGGGCCACTGGCAAATCTACAACCACAAGGCCCAGGCCGGCGAAGTCAACGGCCTGTG < 1:760606/114‑1 GCGTATCGGCGTACTCAACGGTGAGGCGCTTTACGCCTGCCAGTACTTCATGTCCAAGGGCCACTGGCAAATCTACAACCACAAGGCCCAGGCCGGCGAAGTCAACGGCCTGTG > 2:760606/1‑114 ACTCAACGGTGAGGCGCTTTACGCCTGCCAGTACTTCATGTCCAAGGGCCACTGGCAAATCTACAACCACAAGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGT > 1:659031/1‑111 ACTCAACGGTGAGGCGCTTTACGCCTGCCAGTACTTCATGTCCAAGGGCCACTGGCAAATCTACAACCACAAGGCACAGGCCGTTGACTTCGCCGGCCTGGGCCTTGTGGT < 2:659031/111‑1 GCCCAGGCCGGCGAAGTCAACGGCCTGTGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGTCAGGCGTAAAACGCCTCACCCTTGAATACGCCGATACACCAGTCGTATTCGGTGTAGCAGTACTCCTGGGCCAG > 1:622949/1‑150 GCCCAGGCCGGCGAAGTCAACGGCCTGTGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTGGGCCAG > 1:617444/1‑150 CAGGCCGGCGAAGTCAACGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGA > 1:1216139/1‑98 CAGGCCGGCGAAGTCAACGGCCTGGGCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGA < 2:1216139/98‑1 GCCTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTGGGCCAGCAGCAGTACCGAGTGTTCGAACAGCTCC < 1:671566/150‑1 CACCGAATACGACTGGCGTATCGGCGTACTCAACGGTGAGGCGCTTTACGCCTGCCAGTACTTCATGTCCAAGGGCCACTGGCAAATCTACAACCACAAGGCCCAGGCCGGCGAAGTCAACGGCCTGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3360113‑3359983‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTTGTGGTTGTAGATTTGCCAGTGGCCCTTGGACATGAAGTACTGGCAGGCGTAAAGCGCCTCACCGTTGAGTACGCCGATACGCCAGTCGTATTCGGTGTAGCAGTACTCCTGGGCCAGCAGCAGTACCGAGTGTTCGAACAGCTCC > NC_002947/3360015‑3360161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |