New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3542087	88 (1.210)	8 (0.120)	8/234	NT	8.6%	coding (679/966 nt)	galE	UDP‑glucose 4‑epimerase
	?	NC_002947	= 3542107	86 (1.250)					coding (659/966 nt)	galE	UDP‑glucose 4‑epimerase

CCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3541933‑3542087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcatgTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCACT  <  NC_002947/3542107‑3541959                                                                                                                                                                                                                                                                                                                     CCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGT                                                                                                                                                               >  1:1810808/1‑150                               ATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGC‑GG‑CTGCC‑CATGC                                                                                                                              >  1:973455/1‑150                                                            ATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACT                                                                                                                           <  1:600704/124‑1                                                            ATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACT                                                                                                                           >  2:600704/1‑124                                                                                                      GTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATGCACTGCCAGTGCATGTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACTGGCAGTGGATTATCTA                                                                                                           >  2:1117487/1‑98                                                                                                      GTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACTGGCAGTGGATTATCTA                                                                                                           <  1:1117487/98‑1                                                                                                                              GTCCAGTAGATAATCCACTGCCAGTGCATG‑GGCAG‑CC‑GCCAGGTCTGCC‑CATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGG                                           >  1:1185202/1‑137                                                                                                                              GTCCAGTAGATAATCCACTGCCAGTGCATG‑GGCAG‑CC‑GCCAGGTCTGCC‑CATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGG                                           <  2:1185202/137‑1                                                                                                                               TCCAGTAGATAATCCACTGCCAGTGCATG‑GGCAG‑CC‑GCCAGGTCTGCCACATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGC                              >  2:973455/1‑150                                                                                                                                                       GCATGTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGATCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGG              <  1:1225422/142‑1                                                                                                                                                       GCATGTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGATCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGG              >  2:1225422/1‑142                                                                                                                                                       GCATGTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGCGCCGTGACCGCGCGACAGAT      >  1:1646611/1‑150                                                                                                                                                         ATGTGGCAGGCCTGGC‑GG‑CTGCC‑CATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTCCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCA    >  1:184753/1‑150                                                                                                                                                          TGTGGCAGACCTGGC‑GG‑CTGCC‑CAAGCCGCTGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCAC   >  1:51647/1‑150                                                                                                                                                           GTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCACT  >  2:1152593/1‑150                                                                                                                                                                                                                                                                                                                     CCGGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3541933‑3542087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcatgTGGCAGACCTGGC‑GG‑CTGCC‑CATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCACT  <  NC_002947/3542107‑3541959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.