New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3543959	63 (0.860)	4 (0.060)	4/234	NT	6.6%	coding (1519/2607 nt)	PP_3130	hypothetical protein
	?	NC_002947	= 3543968	54 (0.780)					coding (1510/2607 nt)	PP_3130	hypothetical protein

GATCATGCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3543804‑3543959 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccac‑T‑TGCGCAGCGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCGCACTGCCGGCATTGAGCGTTGGCGATGTCATCGACGCCCACAGCTACGGCGACACAGGCCAACTGGAGAAGAACCCG  <  NC_002947/3543968‑3543825                                                                                                                                                                                                                                                                                                                GATCATGCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCAC                                                                                                                                                          >  2:981815/1‑150       GCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCAC                                                                                                                                                    >  2:1184346/1‑150                    AGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCC                                                                                                                                                       >  1:1325159/1‑134                    AGCGGGTTCTTCTCCAGTTGGCCTGCGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCC                                                                                                                                                       <  2:1325159/134‑1                                  CAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCAC                                                                                                                                                          >  1:1449757/1‑117                                  CAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCAC                                                                                                                                                          <  2:1449757/117‑1                                                                                                                                        AATGGGGACTTTCACGCCCACGC‑TGCGCA‑AGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCGCACTGCCGGCATTGAGCGTTGG                                                         <  1:1605973/110‑1                                                                                                                                        AATGGGGACTTTCACGCCCACGC‑TGCGCA‑AGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCGCACTGCCGGCATTGAGCGTTGG                                                         >  2:1605973/1‑110                                                                                                                                             GGACTTTCACGCCCACGC‑TGCGCA‑AGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCACACTGCCGGCATTGAGCGTTGGCGATGTCATCGACGCCCACA                                     >  1:612629/1‑125                                                                                                                                             GGACTTTCACGCCCAC‑GCTGCGCA‑AGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCGCACTGCCGGCATTGAGCGTTGGCGATGTCATCGACGCCCACA                                     <  2:612629/125‑1                                                                                                                                                      CGCCCAC‑T‑TGCGCAGCGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCGCACTGCCGGCATTGAGCGTTGGCGATGTCATCGACGCCCACAGCTACGGCGACACAGGCCAACTGGAGAAGAACCC   <  2:382384/150‑1                                                                                                                                                       GCCCAC‑T‑TGCGCAGCGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCGCACTGCCGGCATTGAGCGTTGGCGATGTCATCGACGCCCACAGCTACGGCGACACAGGCCAACTGGAGAAGAACCCG  >  2:1826364/1‑150                                                                                                                                                        CCCAC‑T‑TGCGCAGCGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCGCACTGCCGGCATTGAGCGTTGGCGATGTCATCGACGCCCACAGCTACGGCGACACAGGCCAACTGGAGAAGAACCCG  >  1:1174459/1‑149                                                                                                                                                        CCCAC‑T‑TGCGCAGCGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCGCACTGCCGGCATTGAGCGTTGGCGATGTCATCGACGCCCACAGCTACGGCGACACAGGCCAACTGGAGAAGAACCCG  <  2:1174459/149‑1                                                                                                                                                                                                                                                                                                                GATCATGCCGTCGCTGGTCAGCGGGTTCTTCTCCAGTTGGCCTGTGTCGCCGTAGCTGTGGGCGTCGATGACATCGCCAACGCTCAATGCCGGCAGTGCGCTAAGCCCATTACCGCCCCAGGTGCTGGTGGTAGCAATGGGGACTTTCACGCCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3543804‑3543959 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccac‑T‑TGCGCAGCGTGGGCGTGAAAGTCCCCATTGCTACCACCAGCACCTGGGGCGGTAATGGGCTTAGCGCACTGCCGGCATTGAGCGTTGGCGATGTCATCGACGCCCACAGCTACGGCGACACAGGCCAACTGGAGAAGAACCCG  <  NC_002947/3543968‑3543825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.