New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3617753	62 (0.850)	4 (0.060)	4/234	NT	5.6%	coding (735/1170 nt)	PP_3188	hypothetical protein
	?	NC_002947	= 3617786	77 (1.120)					coding (768/1170 nt)	PP_3188	hypothetical protein

TGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3617598‑3617753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcctgGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACAGCGCGCCCAACGTCTCGGGTAAGTCCTGTGTATCGGCCAGCAGCACCACGAACAGGTCGCCC  <  NC_002947/3617786‑3617639                                                                                                                                                                                                                                                                                                                  TGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATG                                                                                                                                                            >  1:693817/1‑150  GGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGG                                                                                                                                                           <  1:1721172/150‑1                                                 CTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCAT                                                                                                            >  2:1337471/1‑150                                                           TGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCC                                                                                                  <  1:1337471/150‑1                                                                                      CCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCAT                                                                                                            <  1:27239/113‑1                                                                                      CCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCAT                                                                                                            >  2:27239/1‑113                                                                                                                                                        GCCTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACAGCGCGCCCAACGTCTCGGGTAAGTCCTGTG                                  >  1:182762/1‑121                                                                                                                                                        GCCTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACAGCGCGCCCAACGTCTCGGGTAAGTCCTGTG                                  <  2:182762/121‑1                                                                                                                                                          CTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACAGCGCGCCCAACGTCTCGGGTAAGTCCTGTGTATCGGCCAGCAGCACCACGAACAGGTCGCC   >  2:557147/1‑150                                                                                                                                                          CTGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACAGCGCGCCAATCTGCTGGGGTAAGTCCTGTGTATCGGCCAGCAGCACCACGAACAGGTCGCC   >  1:611634/1‑150                                                                                                                                                           TGGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGGCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACAGCGCGCCCAACGTCTCGGGTAAGTCCTGTGTATCGGCCAGCAGCACCACGAACAGGTCGCCC  <  2:137078/150‑1                                                                                                                                                                                                                                                                                                                  TGGTGCCGCCAGCGCCCCGGCAGTGTGACGGCGCAGTTGCCGGGCGACCTGTTCGTGGTGCTGCTGGCCGATACACAGGACTTACCCGAGACGTTGGGCGCGCTGTACCGGCAGCTGCAAGCCGCGACAGGTGAACTGGGCCTCTACATGGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3617598‑3617753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcctgGCGATAGTGCGCGCAATCGTCAGCGAGGCTCGACAGGCCCATGTAGAGGCCCAGTTCACCTGTCGCGGCTTGCAGCTGCCGGTACAGCGCGCCCAACGTCTCGGGTAAGTCCTGTGTATCGGCCAGCAGCACCACGAACAGGTCGCCC  <  NC_002947/3617786‑3617639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.