| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3725182 | 81 (1.110) | 5 (0.070) | 5/240 | NT | 5.9% | coding (709/927 nt) | PP_3290 | universal stress protein family protein |
| ? | NC_002947 | = 3725208 | 82 (1.160) | coding (735/927 nt) | PP_3290 | universal stress protein family protein | |||||
TGTGACGCGCACCTGCATCTGCTATCGGCCTACAACCTGGCAGGGGTATTTGCCTCGGACATGAATGTCTCCCAGGCCTGGATCGACGAGATGCGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3725032‑3725182‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggGCCTCCTTCCATGAAATGTCGGCGGTCCGGCGCGACGCCTTCGGCATCGGCCAGCGCTTCGAATGGCTCCTGCAGTGCCTCGCGCATCTCGTCGATCCAGGCCTGGGAGACATTCATGTCCGAGGCAAATACCCCTGCCAGGTTGTAG < NC_002947/3725208‑3725061 TGTGACGCGCACCTGCATCTGCTATCGGCCTACAACCTGGCAGGGGTATTTGCCTCGGACATGAATGTCTCCCAGGCCTGGATCGACGAGATGCGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCGCCG > 2:1119332/1‑150TGTGACGCGCACCTGCATCTGCTATCGGCCTACAACCTGGCAGGGGTATTTGCCTCGGACATGAATGTCTCCCAGGCCTGGATCGACGAGATGCGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCGCCG > 2:580193/1‑150 CCTGCATCTGCTATCGGCCTACAACCTGGCAGGGGTATTTGCCTCGGACATGAATGTCTCCCAGGCCTGGATCGACGAGATGCGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCGC > 1:28764/1‑137 CCTGCATCTGCTATCGGCCTACAACCTGGCAGGGGTATTTGCCTCGGACATGAATGTCTCCCAGGCCTGGATCGACGAGATGCGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCGC < 2:28764/137‑1 TGCCTCGGACATGAATGTCTCCCAGGCCTGGATCGACGAGATGCGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCGCCGGGCCTCCTTCCATGAAATGTCGGCGGTCCGGCGCGACGCCTTCGGCATCG < 1:1119332/150‑1 TCCCAGGCCTGGATCGACGAGATACGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCACCGGGCCTCCTTCCATGAAATGTCGGCGGTCCGGCGCGACGCCTTC > 1:171298/1‑124 TCCCAGGCCTGGATCGACGAGATACGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCACCGGGCCTCCTTCCATGAAATGTCGGCGGTCCGGCGCGACGCCTTC < 2:171298/124‑1 tACGAGATGCGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCGCCGGGCCTCCTTCCATGAAATGTCGGCGGTCCGG < 1:1088642/96‑1 GACGAGATGCGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCGCCGGGCCTCCTTCCATGAAATGTCGGCGGTCCGG > 2:1088642/1‑97 GGGCCTCCTTCCATGAAATGTCGGCGGTCCGGCGCGACGCCTTCGGCATCGGCCAGCGCTTCGAATGGCTCCTGCAGTGCCTCGCGCATCTCGTCGATCCAGGCCTGGGAGACATTCATGTCCGAGGCAAATACCCCTGCCAGGTTGTAG < 1:757566/150‑1 TGTGACGCGCACCTGCATCTGCTATCGGCCTACAACCTGGCAGGGGTATTTGCCTCGGACATGAATGTCTCCCAGGCCTGGATCGACGAGATGCGCGAGGCACTGCAGGAGCCATTCGAAGCGCTGGCCGATGCCGAAGGCGTCGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3725032‑3725182‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggGCCTCCTTCCATGAAATGTCGGCGGTCCGGCGCGACGCCTTCGGCATCGGCCAGCGCTTCGAATGGCTCCTGCAGTGCCTCGCGCATCTCGTCGATCCAGGCCTGGGAGACATTCATGTCCGAGGCAAATACCCCTGCCAGGTTGTAG < NC_002947/3725208‑3725061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |