| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3727744 = | 64 (0.880) | 4 (0.060) | 4/240 | NT | 6.1% | coding (217/426 nt) | PP_3293 | membrane protein |
| ? | NC_002947 | 3727762 = | 61 (0.860) | coding (199/426 nt) | PP_3293 | membrane protein | |||||
GCTTGTTGCGCCTGAATGACTGGCTACCCCGCCTGAAGCTCTGGAGCCGGTTTCGCATCGTGGCGGGTGTGTTCGGCGCACTGCTGGCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCATGCCGACGGC‑T‑GGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3727896‑3727744‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑t‑gggCCATCAGGTAATACACCAGGGCAAAGCACCAGACCTCAATGGCATGGGCCAGCAGTGCGCCGAACACACCCGCCACGATGCGAAACCGGCTCCAGAGCTTCAGGCGGGGTAGCCAGTCATTCAGGCGCAACAAGC > NC_002947/3727762‑3727896 GCTTGTTGCGCCTGAATGACTGGCTACCCCGCCTGAAGCTCTGGAGCCGGTTTCGCATCGTGGCGGGTGTGTTCGGCGCACTGCTGGCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCATGCCGACGGC‑T < 1:1252515/150‑1GCTTGTTGCGCCTGAATGACTGGCTACCCCGCCTGAAGCTCTGGAGCCGGTTTCGCATCGTGGCGGGTGTGTTCGGCGCACTGCTGGCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCATGCCGACGGC‑T > 1:1907082/1‑150 CTTGTTGCGCCTGAATGACTGGCTACCCCGCCTGAAGCTCTGGAGCCGGTTTCGCATCGTGGCGGGTGTGTTCGGCGCACTGCTGGCCCATGCCATTGAGGTCTGGTGCTTTAACCTGGTGTATTACCTGATGGCCCATGCCGACGGC‑T‑G < 1:645628/150‑1 TGTTGCGCCTGAATGACTGGCTACCCCGCCTGAAGCTCTGGAGCCGGTTTCGCATCGTGGCGGGTGTGTTCGGCGCACTGCTGGCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCATGCCGACGGC‑T‑GGG < 2:1907082/150‑1 TGTTGCGCCTGAATGACTGGCTACCCCGCCTGAAGCTCTGGAGCCGGTTTCGCATCGTGGCGGGTGTGTTCGGCCCACAGCTGTCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCATGCCGACGGC‑T‑GGG > 1:1690820/1‑150 GGCTACCCCGCCTGAAGCTCTGGAGCCGGTTTCGCATCGTGGCGGGTGTGTTCGGCGCACTGCTGGCCCCTGCTCTTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCA‑GCCGTCGGCAT‑GGGCCATCAGGTAATACACCA < 1:1691182/150‑1 GTGGCGGGTGTGTTCGGCGCACTGCTGGCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCATGCCGACGGC‑T‑G < 1:458244/92‑1 GTGGCGGGTGTGTTCGGCGCACTGCTGGCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCATGCCGACGGC‑T‑G > 2:458244/1‑92 TGGCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCA‑GCCGTCGGCAT‑GGGCCATCAGGTAATACACCAGGGCAAAGCACCAGACCTCAATGGCA > 1:552103/1‑113 TGGCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCA‑GCCGTCGGCAT‑GGGCCATCAGGTAATACACCAGGGCAAAGCACCAGACCTCAATGGCA < 2:552103/113‑1 TGCCGACGGC‑TGGGGCCATCAGGTAATACACCAGGGCAAAGCACCAGACCTCAATGGCATGGGCCAGCAGTGCGCCGAACACACCCGCCACGATGCGAAACCGGCTCCAGAGCTTCAGGCGGGGTAGCCAGTCATTCAGGCGCAACAAGC > 2:602915/1‑150 GCTTGTTGCGCCTGAATGACTGGCTACCCCGCCTGAAGCTCTGGAGCCGGTTTCGCATCGTGGCGGGTGTGTTCGGCGCACTGCTGGCCCATGCCATTGAGGTCTGGTGCTTTGCCCTGGTGTATTACCTGATGGCCCATGCCGACGGC‑T‑GGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3727896‑3727744‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑t‑gggCCATCAGGTAATACACCAGGGCAAAGCACCAGACCTCAATGGCATGGGCCAGCAGTGCGCCGAACACACCCGCCACGATGCGAAACCGGCTCCAGAGCTTCAGGCGGGGTAGCCAGTCATTCAGGCGCAACAAGC > NC_002947/3727762‑3727896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |