New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3734840	70 (0.960)	4 (0.060)	4/242	NT	5.3%	coding (794/1104 nt)	PP_3301	RND transporter membrane fusion protein
	?	NC_002947	= 3734922	76 (1.070)					coding (876/1104 nt)	PP_3301	RND transporter membrane fusion protein

CTTCGACCTGCGCCTGGCTCGACTGCGCTGGCCACGCTATTTGGCAAGCCTGCGCAGGCCGTACCCGCCAAACTGCGCTTGCTTTCAGATGCAGCAGACCCCATCACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3734689‑3734840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagTGCGCCGATGGGTATCTGCTTCGCTTCGAAATCCGTATCGGTATCCGGAATCTCAAGCGTAATGGTTGCACCCAATGGCGCGCTCGCCAGAGGCCCAGTGAGCACGTACCTGGCCTCGAATGTGCGCGTGATGGGGTCTGCTGCATC  <  NC_002947/3734922‑3734776                                                                                                                                                                                                                                                                                                             CTTGGACATGCGCCTGGCTCGACTTCGCTGGCCACGCTATTTGGCAAGCCTGCGCAGGCCGTACCCGCCAAACTGCGCTTGCTTTCAGATGCAGCAGACCCCATCACGCGCACATTCGAGGCCAGGTACGTGCTCACTCGGCCTCTGGCG                                                                                                                                                       >  2:1089919/1‑150  taCGACCTGCGCCTGGCTCGACTGCGCTGGCCACGCTATTTGGCAAGCCTGCGCAGGCCGTACCCGCCAAACTGCGCTTGCTTTCAGATGCAGCAGACCCCATCACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGA                                                                                                                                                      >  2:590029/3‑150  TTCGACCTGCGCCTGGCTCGACTGCGCTGGCCACGCTATTTGGCAAGCCTGCGCAGGCCGTACCCGCCAAACTGCGCTTGCTTTCAGATGCAGCAGACCCCATCACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGA                                                                                                                                                      >  1:967715/1‑150  TTCGACCTGCGCCTGGCTCGACTGCGCTGGCCACGCTATTTGGCAAGCCTGCGCAGGCCGTACCCGCCAAACTGCGCTTGCTTTCAGATGCAGCAGACCCCATCACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGA                                                                                                                                                      >  2:43469/1‑150  TTCGACCTGCGCCTGGCTCGACTGCGCTGGCCACGCTATTTGGCAAGCCTGCGCAGGCCGTACCCGCCAAACTGCGCTTGCTTTCAGATGCAGCAGACCCCATCACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGA                                                                                                                                                      >  2:965975/1‑150                                                                                           GCAGCAGACCCCATCACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGAGTGCGCCGATGGGTATCTGCTTCGCTTCGAAATCCGTATCGGTATCCGGAATCTCAAGCGTAATGGTTGCACCCAATGGCGCGCTCGCC                                                             <  1:1164292/150‑1                                                                                           GCAGCAGACCCCATCACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGAGTGCGCCGATGGGTATCTGCTTCGCTTCGAAATCCGTATCGGTATCCGGAATCTCAAGCGTAATGGTTGCACCCAATGGCGCGCTCGCC                                                             >  2:1164292/1‑150                                                                                                          ACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGAGTGCGCCGATGGGTATCTGCTTCGCTTC                                                                                                                          >  1:896820/1‑74                                                                                                          ACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGAGTGCGCCGATGGGTATCTGCTTCGCTTC                                                                                                                          <  2:896820/74‑1                                                                                                                                                      tAGTGCGCCGATGGGTATCTGCTTCGCTTCGAAATCCGTATCGGTATCCGGAATCTCAAGCGTAATGGTTGCACCCAATGGCGCGCTCGCCAGAGGCCCAGTGAGCACGTACCTGGCCTCGAATGTGCGCGTGATGGGGTCTGCTGCATC  <  1:759489/149‑1                                                                                                                                                                                                                                                                                                             CTTCGACCTGCGCCTGGCTCGACTGCGCTGGCCACGCTATTTGGCAAGCCTGCGCAGGCCGTACCCGCCAAACTGCGCTTGCTTTCAGATGCAGCAGACCCCATCACGCGCACATTCGAGGCCAGGTACGTGCTCACTGGGCCTCTGGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3734689‑3734840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagTGCGCCGATGGGTATCTGCTTCGCTTCGAAATCCGTATCGGTATCCGGAATCTCAAGCGTAATGGTTGCACCCAATGGCGCGCTCGCCAGAGGCCCAGTGAGCACGTACCTGGCCTCGAATGTGCGCGTGATGGGGTCTGCTGCATC  <  NC_002947/3734922‑3734776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.