New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3931084	69 (0.950)	4 (0.060)	4/236	NT	5.8%	coding (68/1293 nt)	PP_5603	FAD dependent oxidoreductase
	?	NC_002947	= 3931100	65 (0.940)					coding (52/1293 nt)	PP_5603	FAD dependent oxidoreductase

CCAGCGTACCTGGCGGGTGGCCGGCATGGCCGCCTGGCTCAAGGCCCCGCCAAGGCCTGCATGACGCAAGCCCTCCAGCACCCGCTGCGAAACGCCTTCAACTGCCGCGAAACGGCGCCACTCCGACACCACTGTCACGGAGTAACCCAGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3930930‑3931084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccAC‑GGCCATTGGCTTGCGGCGGCTGGGTTACTCCGTGACAGTGGTGTCGGAGTGGCGCCGTTTCGCGGCAGTTGAAGGCGTTTCGCAGCGGGTGCTGGAGGGCTTGCGTCATGCAGGCCTTGGCGGGGCCTTGAG  <  NC_002947/3931100‑3930967                                                                                                                                                                                                                                                                                                    CCAGCGTACCTGGCGGGTGGCCGGCATGGCCGCCTGGCTCAAGGCCCCGCCAAGGCCTGCATGACGCAAGCCCTCCAGCACCCGCTGCGAAACGCCTTCAACTGCCGCGAAACGGCGCCACTCCGACACCACTGTCACGGAGTAACCCAG                                                                                                                                              <  2:549936/150‑1      GTACCTGGCGGGTGGCCGGCATGGCCGCCTGGCTCAAGGCCCCGCCAAGGCCTGCATGACGCAAGCCCTCCAGCACCCGCTGCGAAACGCCTTCAACTGCCGCGAAACGGCGCCACTCCGACACCACTGTCACGGAGTAACCCAGCCGCC                                                                                                                                         >  2:500616/1‑150                                                                         CTCCAGCACCCGCTGCGAAACGCCTTCAACTGCCGCGAAACGGCGCCACTCCGACACCACTGTCACGGAGTAACCCAGCCGCCAC‑GGCCATTGGCTTGCGGCGGCTGG                                                                                                               >  1:273724/1‑108                                                                         CTCCAGCACCCGCTGCGAAACGCCTTCAACTGCCGCGAAACGGCGCCACTCCGACACCACTGTCACGGAGTAACCCAGCCGCCAC‑GGCCATTGGCTTGCGGCGGCTGG                                                                                                               <  2:273724/108‑1                                                                                                                             GACACCACTGTCACGGAGTAACCCAGCCGCCGCAAGCCAATGGC‑CGTGGCGGCTGGGTTACTCCGTGACAGTGGTGTCGGAGTGGCGCCGTTTCGCGGCAGTTGAAGGCGTTTCGCAGCGGGTGCTGGAGGGCTTGCGTCATGCAGGCCT                 >  1:500616/1‑150                                                                                                                                            GAGTAACCCAGCCGCCGCAAGCCAATGGC‑CGTGGCGGCTGGGTTACTCCGTGACAGTGGTGTCGGAGTGGCGCCGTTTCGCGGCAGTTGAAGGCGTTTCGCAGCGGGTGCTGGAGGGCTTGCGTCATGCAGGCCTTGGCGGGGCCTTGAG  >  2:1864721/1‑150                                                                                                                                                                                                                                                                                                    CCAGCGTACCTGGCGGGTGGCCGGCATGGCCGCCTGGCTCAAGGCCCCGCCAAGGCCTGCATGACGCAAGCCCTCCAGCACCCGCTGCGAAACGCCTTCAACTGCCGCGAAACGGCGCCACTCCGACACCACTGTCACGGAGTAACCCAGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3930930‑3931084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccAC‑GGCCATTGGCTTGCGGCGGCTGGGTTACTCCGTGACAGTGGTGTCGGAGTGGCGCCGTTTCGCGGCAGTTGAAGGCGTTTCGCAGCGGGTGCTGGAGGGCTTGCGTCATGCAGGCCTTGGCGGGGCCTTGAG  <  NC_002947/3931100‑3930967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.