New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3952711 =	71 (0.970)	4 (0.060)	4/230	NT	5.8%	coding (1856/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein
	?	NC_002947	3952752 =	65 (0.960)					coding (1815/1977 nt)	PP_5606	YVTN beta‑propeller repeat‑containing protein

ATTGTCGGTGACGACGGGCAGCCGCGCCTGGGCCTGAACGACCTGAGCCTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCGCCTGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3952868‑3952711 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctggtaGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAGGCGCGGCTGCCCGTCGTCACCGACAATACGCACCCGCGCGGTGAAGTCGCTGTGCTGCG  >  NC_002947/3952752‑3952900                                                                                                                                                                                                                                                                                                                     ATTGTCGGTGACGACGGGCAGCCGCGCCTGGGCCTGAACGACCTGAGCCTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGC                                                                                                                                                               <  1:844118/150‑1  TTGTCGGTGACGACGGGCAGCCGCGCCTGGGCCTGAACGACCTGAGCCTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCG                                                                                                                                                              >  2:1310987/1‑150     TCGGTGACGACGGGCAGCCGCGCCTGGGCCTGAACGACCTGAGCCTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCGCCT                                                                                                                                                           <  1:1310987/150‑1     TCGGTGACGACGGGCAGCCGCGCCTGGGCCTGAACGACCTGAGCCTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCGCCT                                                                                                                                                           <  2:32144/150‑1     TCGGTGACGACGGGCAGCCGCGCCTGGGCCTGAACGACCTGAGCCTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCGCCT                                                                                                                                                           <  2:345770/150‑1       GGTGACGACGGGCAGCCGCGCCTGGGCCTGAACGACCTGAGCCTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCGCCTGG                                                                                                                                                         <  2:1102860/150‑1                                                 CTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCGCCTGGT                                                                                                                                                        <  1:1738683/109‑1                                                 CTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCGCCTGGT                                                                                                                                                        >  2:1738683/1‑109                                                                                                                      TACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCGCCTGGTAGACCCCCTCGCCCACCTCGTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAGGCGCGGCTGCCCGTCGTCc                                          >  1:1694784/1‑149                                                                                                                           GGCGGCGCTGAACTTGCCTGAGGCCGGCGCCTGGTAGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCA                                                              <  2:55462/125‑1                                                                                                                           GGCGGCGCTGAACTTGCCTGAGGCCGGCGCCTGGTAGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCA                                                              >  1:55462/1‑125                                                                                                                                             TGAGGCCGGCGCCTGGTAGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAGGCGCGGCTGCCCGTCGTCACCGACAATACGCACCCGCGCGGT                   >  2:1544790/1‑150                                                                                                                                                         CTGGTAGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAGGCGCGGCTGCCCGTCGTCACCGACAATACGCACCCGCGCGGTGAAGCCGCTacc       >  2:1401406/1‑147                                                                                                                                                          TGGTAGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAGGCGCGGCTGCCCGTCGTCACCGACAATACGCACCCGCGCGGTGAAGTCGCTGTGC      >  2:640134/1‑150                                                                                                                                                            GTAGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAGGCGCGGCTGCCCGTCGTCACCGACAATACGCACCCGCGCGGTGAAGTCGCTGTGCTG    >  2:614455/1‑150                                                                                                                                                            GTAGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAGGCGCGGCTGCCCGTCGTCACCGACAATACGCACCCGCGCGGTGAAGTCGCTGTGCTG    <  2:844118/150‑1                                                                                                                                                            GTAGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAG                                                             >  2:1366947/1‑93                                                                                                                                                            GTAGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAG                                                             <  1:1366947/93‑1                                                                                                                                                              AGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAGGCGCGGCTGCCCGTCGTCACCGACAATACGCACCCGCGCGGTGAAGTCGCTGTGCTGCG  <  1:1544790/150‑1                                                                                                                                                                                                                                                                                                                     ATTGTCGGTGACGACGGGCAGCCGCGCCTGGGCCTGAACGACCTGAGCCTGCGCTACTTCCTGGCGCCATCGTCGATGCCGCGCAACCTTCGGTTGCAAGAGGTGGGCGAGGGGGTCTACCAGGCGGCGCTGAACTTGCCTGAGGCCGGCGCCTGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3952868‑3952711 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctggtaGACCCCCTCGCCCACCTCTTGCAACCGAAGGTTGCGCGGCATCGACGATGGCGCCAGGAAGTAGCGCAGGCTCAGGTCGTTCAGGCCCAGGCGCGGCTGCCCGTCGTCACCGACAATACGCACCCGCGCGGTGAAGTCGCTGTGCTGCG  >  NC_002947/3952752‑3952900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.