| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4117130 = | 58 (0.790) | 3 (0.040) | 3/236 | NT | 5.3% | coding (231/456 nt) | iorA‑II | isoquinoline 1‑oxidoreductase subunit alpha |
| ? | NC_002947 | 4117168 = | 52 (0.750) | coding (269/456 nt) | iorA‑II | isoquinoline 1‑oxidoreductase subunit alpha | |||||
GGTTGACCATGGCTGCATCGATCTGCGCATCGCTGGGTTTGGGCGTGTGCTTGAGCAGCGCCGTGGCTGCCATGACCTGGCCAGACTGGCAATAGCCGCATTGAGCCACCTGGTGCTCGACCCAGGCGGCGACCACCCGTTTGCCGACGGGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4117284‑4117130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtcgAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTCAAGCACACGCCCAAACCCAGCGATGCGCAGATCGATGCAGCCATGGTCAACCTGTGCCGCTGCGGCACCTACAACGCCATC > NC_002947/4117168‑4117313 GGTTGACCATGGCTGCATCGATCTGCGCATCGCTGGGTTTGGGCGTGTGCTTGCGCAGCGCGGTGGCTGCCATGACCTGGCCAGACTGGCAATAGCCGCATTGAGCCACCTGGTGCTCGACCCAGGCGGCGACCACCCGTTTGCCGACGG > 2:220535/1‑150 CCGCATTGAGCCACCTGGTGCTCGACCCAGGCGGCGACCACCCGTTTGCCGACGGGGTCGATCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTCAAGCACACCCCCAAACCCAGCGATG > 2:264990/1‑150 GTGCTCGACCCAGGCGGCGACCACCCGTTTGCCGACGGGGTCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCT < 1:1475021/78‑1 GTGCTCGACCCAGGCGGCGACCACCCGTTTGCCGACGGGGTCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCT > 2:1475021/1‑78 GGGTCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTCAAGCACACGCCCAAACCCAGCGATGCGCAGATCGATGCAGCCATGGTCAACCTGTGCCGCTGCGGCACCTACAACGCCA > 1:1431226/1‑150 GGGTCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTCAAGCACACGCCCAAACCCAGCGATGCGCAGATCGATGCAGCCATGGTCAACCTGTGCCGCTGCGGCACCTACAACGCCA < 1:864221/150‑1 GGTCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTCAAGCACACGCCCAAACCCAGCGATGCGCAGATCGATGCAGCCATGGTCAACCTGTGCCGCTGCGGCACCTACAACGCCAT > 1:1432682/1‑150 GTCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTCAAGCACACGCCCAAACCCAGCGATGCGCAGATCGATGCAGCCATGGTCAACCTGTGCCGCTGCGGCACCTACAACGCCATC > 2:1605403/1‑150 GTCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTC > 1:841606/1‑69 GTCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTC < 2:841606/69‑1 TCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTCAAGCACACGCCCAAACCCAGCGATGCGCAGATCGATGCAGCCATGGTCAACCTGTGCCGCTGCGGCACCTACAAC > 1:1880804/1‑143 TCGAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTCAAGCACACGCCCAAACCCAGCGATGCGCAGATCGATGCAGCCATGGTCAACCTGTGCCGCTGCGGCACCTACAAC < 2:1880804/143‑1 GGTTGACCATGGCTGCATCGATCTGCGCATCGCTGGGTTTGGGCGTGTGCTTGAGCAGCGCCGTGGCTGCCATGACCTGGCCAGACTGGCAATAGCCGCATTGAGCCACCTGGTGCTCGACCCAGGCGGCGACCACCCGTTTGCCGACGGGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4117284‑4117130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtcgAGCACCAGGTGGCTCAATGCGGCTATTGCCAGTCTGGCCAGGTCATGGCAGCCACGGCGCTGCTCAAGCACACGCCCAAACCCAGCGATGCGCAGATCGATGCAGCCATGGTCAACCTGTGCCGCTGCGGCACCTACAACGCCATC > NC_002947/4117168‑4117313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |