| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4128161 = | 65 (0.890) | 7 (0.100) | 6/240 | NT | 10.0% | coding (486/651 nt) | htrG | signal transduction protein |
| ? | NC_002947 | 4128196 = | 63 (0.890) | coding (521/651 nt) | htrG | signal transduction protein | |||||
TTCTTCTTGCGCCCACGGGTCAGTGCCGGCAGGATCAGCCCCGCCAGCAAGCCTGCACCGGCAATGCTGCCGCCATACACCATGTAGCGCATCATCACCTGCTTGTTCTCATCCCCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4128310‑4128161‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACTGACCCGTGGGCGCAAGAAGAACGATCGCTGGTTCTGAGCTCGGCAAGGCGTCGG > NC_002947/4128196‑4128343 TTCTTCTTGCGCCCACGGGTCAGTGCCGGCAGGATCAGCCCCGCCAGCAAGCCTGCACCGGCAATGCTGCCGCCATACACCATGTAGCGCATCATCACCTGCTTGTTCTCATCCCCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGG > 1:1058311/1‑150TTCTTCTTGCGCCCACGGGTCAGTGCCGGCAGGATCAGCCCCGCCAGCAAGCCTGCACCGGCAATGCTGCCGCCATACACCATGTAGCGCATCATCACCTGCTTGTTCTCATCCCCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGG < 2:1058311/150‑1TTCTTCTTGCGCCCACGGGTCAGTGCCGGCAGGATCAGCCCCGCCAGCAAGCCTGCACCGGCAATGCTGCCGCCATACACCATGTAGCGCATCATCACCTGCTTGTTCTCATCCCCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGG < 2:982729/150‑1 TCCCCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGC > 1:1633560/1‑117 TCCCCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGC < 2:1633560/117‑1 CCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGG > 1:493846/1‑111 CCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGG < 2:493846/111‑1 CCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGGGGGATGAGAACAAGCAGGT > 1:1449965/1‑55 CCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGGGGGATGAGAACAAGCAGGT < 2:1449965/55‑1 CCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACTGACCCGTGGGCGCAAGAAGAA > 2:1418935/1‑150 GGGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACTGACCCGTGGGCGCAAGAAGAACGATCGCTGGTTCTGAGCTCGGCAAGGCGTCGG < 2:1399779/150‑1 TTCTTCTTGCGCCCACGGGTCAGTGCCGGCAGGATCAGCCCCGCCAGCAAGCCTGCACCGGCAATGCTGCCGCCATACACCATGTAGCGCATCATCACCTGCTTGTTCTCATCCCCCAGGCGGGCCTGGGTATCGCGCAGGTCCGACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4128310‑4128161‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGGGATGAGAACAAGCAGGTGATGATGCGCTACATGGTGTATGGCGGCAGCATTGCCGGTGCAGGCTTGCTGGCGGGGCTGATCCTGCCGGCACTGACCCGTGGGCGCAAGAAGAACGATCGCTGGTTCTGAGCTCGGCAAGGCGTCGG > NC_002947/4128196‑4128343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |