| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4165837 = | 55 (0.750) | 3 (0.040) | 3/234 | NT | 5.7% | coding (309/1335 nt) | PP_3666 | MHS family metabolite MFS transporter |
| ? | NC_002947 | 4165876 = | 47 (0.680) | coding (270/1335 nt) | PP_3666 | MHS family metabolite MFS transporter | |||||
GCCACCTTCTTCCCGCAAACTGACAAGACCACCGGTTTGCTGGCCACCTTTGCGGTATTCGCCCTGTCGTTCCTGGTGCGCCCGCTGGGTGGCATCGTCTGGGGCCATTTCGGCGATCGACACGGTCGGCGCAACGCGCTCTCGTGGTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4165989‑4165837‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgatcGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCG > NC_002947/4165876‑4166023 GCCACCTTCTTCCCGCAAACTGACAAGACCACCGGTTTGCTGGCCACCTTTGCGGTATTCGCCCTGTCGTTCCTGGTGCGCCCGCTGGGTGGCATCGTCTGGGGCCATTTCGGCGATCGACACGGTCGGCGCAACGCGCTCTCGTGGTCG > 2:1120828/1‑150 ATCGACACGGTCGGCGCAACGCGCTCTCGTGGTCGATCGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTCTTGTCAGTTTGCGGGAAGAAGGTG > 2:58587/1‑150 GGTCGGCGCAACGCGCTCTCGTGGTCGATCGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTG > 1:1659106/1‑115 GGTCGGCGCAACGCGCTCTCGTGGTCGATCGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTG < 2:1659106/115‑1 GTCGATCGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGG < 1:1162748/150‑1 GTCGATCGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTG > 1:1068519/1‑92 GTCGATCGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTG < 2:1068519/92‑1 ATCGCCGAATTGGCCCCAGACGATGCCACCCAGTGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGAAAACCGGTCGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGC < 2:125594/150‑1 ATCGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTC < 1:597787/91‑1 ATCGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTC > 2:597787/1‑91 TCGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCG > 1:678020/1‑150 GCCACCTTCTTCCCGCAAACTGACAAGACCACCGGTTTGCTGGCCACCTTTGCGGTATTCGCCCTGTCGTTCCTGGTGCGCCCGCTGGGTGGCATCGTCTGGGGCCATTTCGGCGATCGACACGGTCGGCGCAACGCGCTCTCGTGGTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4165989‑4165837‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgatcGCCGAAATGGCCCCAGACGATGCCACCCAGCGGGCGCACCAGGAACGACAGGGCGAATACCGCAAAGGTGGCCAGCAAACCGGTGGTCTTGTCAGTTTGCGGGAAGAAGGTGGCGGCGATGATGGTGGCCAGATAGCCGTAGGCGGCG > NC_002947/4165876‑4166023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |