| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4344345 | 70 (0.960) | 5 (0.080) | 5/210 | NT | 7.1% | intergenic (+32/‑124) | PP_3817/PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein |
| ? | NC_002947 | = 4344365 | 71 (1.150) | intergenic (+52/‑104) | PP_3817/PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein | |||||
CGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4344178‑4344345‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagcgcctgccagatcgTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCACGCTGT < NC_002947/4344365‑4344222 CGTGAAGGCACTGTCGGCGGCGGGCCTGATGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGAGGCGCATTAACGCTCTTGTACGTT > 2:566880/1‑150 GTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTG > 2:190571/1‑150 GTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTG > 2:1179416/1‑150 GAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCA > 1:1100656/1‑150 GGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTT < 1:355893/144‑1 GGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTT > 2:355893/1‑144 ACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCT > 1:1700677/1‑150 GTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCC < 2:285614/150‑1 TCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCA > 1:400045/1‑150 GGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGA < 1:190571/150‑1 GGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGGTGCAGCGCCTGCCAGATCGTGTG > 2:1111902/1‑150 ATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAAAGCGCTTGTACGTTGCAGCGCCTGCCAGATCGTGTGCCG > 1:593617/1‑150 GCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGTCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGC < 1:1516431/150‑1 CGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCA < 2:593617/150‑1 GCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCT < 1:1438795/97‑1 GCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCT > 2:1438795/1‑97 CAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCAC < 1:698188/150‑1 AGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACC > 2:1700677/1‑150 CTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCA < 2:1253108/149‑1 CTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCA > 1:1253108/1‑149 TGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCACG > 2:1491121/1‑150 GCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAGTGCAAGCGTCTGCCACTGCCCAACGCACCTTCACGC > 1:1599402/1‑150 GCCAGATCGGGCACCGCCCGCGCGGCACACGATCTGGCAGGCGCTGCACCGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCACGC > 1:1111902/1‑150 CAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCACGCTG > 2:1100656/1‑150 AGATCGTGTGCGGCGTGGGCGGTGCTCGATCTGGCAGGCGCTGCAGCGTTCAAGCGCGTTAATGCGCCCTGGCCGACTTGCTCAGGTCGCTCTCGGCCCAGTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCACGCTGT < 2:86613/150‑1 AGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAGTGCAAGCGTC > 1:638948/1‑121 AGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAGTGCAAGCGTC < 2:638948/121‑1 AGATCGTGTGACGCGCGGGCGGTGCGCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCTCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCACGCTGT < 1:614283/150‑1 GATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCA < 2:1422017/143‑1 GATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCA > 1:1422017/1‑143 CGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4344178‑4344345‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagcgcctgccagatcgTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCAACGTACAAGAGCGTTAATGCGCCCCGGCCGACTTGCTCAGGTCGCTCTCGGCCCATTCGGTATAAATGCAAGCGTCTGCCACTGCCCAACGCACCTTCACGCTGT < NC_002947/4344365‑4344222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |