New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4350173 =	72 (0.990)	11 (0.170)	10/214	NT	15.8%	intergenic (‑181/+56)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein
	?	NC_002947	4350224 =	55 (0.870)					intergenic (‑232/+5)	galU/PP_3822	UTP‑glucose‑1‑phosphate uridylyltransferase/cytochrome c family protein

TAGAGGGATCCATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4350338‑4350173 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaggccgccaccggcTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGTGGCGG  >  NC_002947/4350224‑4350370                                                                                                                                                                                                                                                                                                                           TAGAGGGATCCATCGAGAAGAGGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCGGGTTGATGGGGTGCTGATCGGACAAGGGGCGGGTAGCTGAGGTAAGCCTGTGGCGGGCTCTCGGCGCGGGAGCCCGTCGA                                                                                                                                                                     >  2:1849264/1‑150  AGAGGGATCGATCTAGAAGATGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGATCCCTTCGAA                                                                                                                                                                    <  2:482754/150‑1        ATCCATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCC                                                                                                                                                              >  1:1076905/1‑150         TCCATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGTGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCG                                                                                                                                                             >  1:841258/1‑150            ATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCA                                                                                                                                                          >  1:265148/1‑150                                 TTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCC                                                                                                                                                              >  1:1128510/1‑125                                 TTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCC                                                                                                                                                              <  2:1128510/125‑1                                          AATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGC                                                                                                                                                            <  2:414622/118‑1                                          AATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGC                                                                                                                                                            >  1:414622/1‑118                                                                                                                GTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGT                                                      >  1:300429/1‑150                                                                                                                 TAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAAC                                                                                    <  1:1759757/119‑1                                                                                                                 TAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAAC                                                                                    >  2:1759757/1‑119                                                                                                                           GCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACC                                                                                   <  2:900073/110‑1                                                                                                                           GCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACC                                                                                   >  1:900073/1‑110                                                                                                                              GCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGAT                                             <  2:1082323/145‑1                                                                                                                              GCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGAT                                             >  1:1082323/1‑145                                                                                                                                CTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACC                                                                                   >  2:1119655/1‑105                                                                                                                                CTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACC                                                                                   <  1:1119655/105‑1                                                                                                                                          GTGAGCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACC                            >  2:1075105/1‑150                                                                                                                                              GCCCGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGG                        <  1:1075105/150‑1                                                                                                                                                 CGTCGAAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTC                     <  2:300429/150‑1                                                                                                                                                      AAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTG                >  1:465821/1‑150                                                                                                                                                      AAGAGGCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTG                <  1:298197/150‑1                                                                                                                                                           GCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGG               >  1:39331/1‑146                                                                                                                                                           GCCGCCACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGG               <  2:39331/146‑1                                                                                                                                                                 ACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGTGG     >  2:1798041/1‑150                                                                                                                                                                 ACCGGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGTGG     >  1:1729935/1‑150                                                                                                                                                                    GGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGTGGCGG  <  2:1641322/150‑1                                                                                                                                                                    GGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGT                 <  1:1831614/135‑1                                                                                                                                                                    GGCTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGT                 >  2:1831614/1‑135                                                                                                                                                                                                                                                                                                                           TAGAGGGATCCATCGAGAAGACGCGGGTGAAGTTTCATGCCAATGATGGGGTTAACCTGTATGGTAAGCAGGTTGATGGGGTGCTGATCGGACAAGGGACGGGTAGCTGAGGTAAGCCGGTGGCGGCCTCTTGGCGCGTGAGCCCGTCGAAGAGGCCGCCACCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4350338‑4350173 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaggccgccaccggcTTACCTCAGCTACCCGTCCCTTGTCCGATCAGCACCCCATCAACCTGCTTACCATACAGGTTAACCCCATCATTGGCATGAAACTTCACCCGCGTCTTCTCGATGGATCCCTCTACCAACCGCGGGTCCTGTGGCCGCTCGTGGCGG  >  NC_002947/4350224‑4350370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.