New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4363372 =	62 (0.850)	4 (0.060)	3/238	NT	6.6%	coding (414/1011 nt)	adhP	alcohol dehydrogenase
	?	NC_002947	4363401 =	53 (0.760)					coding (443/1011 nt)	adhP	alcohol dehydrogenase

TTTGGCGTTGAACACATTCTTGGCATATTGCAGGGCCAGGTTGCCCAGGCCGCCGAGCCCGTAGATGGCGATCCATTGGCCGGGGCGGACGTTGGAGATTTTCACTGCCTTGTAGGTCGTGACGCCGGC‑GCAGGTGATGCTGCTGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4363522‑4363372 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATCGCCATCTACGGGCTCGGCGGCCTGGGCAACCTGGCCCTGCAATATGCCAAGAATGTGTTCAACGCCAAAGTCATCGCCATCGACGTCAACGAAGA  >  NC_002947/4363401‑4363548                                                                                                                                                                                                                                                                                                              TTTGGCGTTGAACACATTCTTGGCATATTGCAGGGCCAGGTTGCCCAGGCCGCCGAGCCCGTAGATGGCGATCCATTGGCCGGGGCGGACGTTGGAGATTTTCACTGCCTTGTAGGTCGTGACGCCGGC‑GCAGGTGATGCTGCTGGCGGC                                                                                                                                                       >  2:462423/1‑150                     TGGCATATTGCAGGGCCAGGTTGCCCAGGCCGCCGAGCCCGTAGATGGCGATCCATTGGCCGGGGCGGACGTTGGAGATTTTCACTGCCTTGTAGGTCGTGACGCCGCCAGCAGCATCACCTGC‑GCCGGCGTCACGACCTACAAGGCAGT                                                                                                                                   <  1:657111/150‑1                                                                                                        ACTGCCTTGTAGGGCGTGACGCCGGC‑GCAGGTGATGCTGCTGGCGGCGTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATGGCCATCTACGGGCTCGGCGGCCTGGGCAACCTGGCCCTGCAATATGCCA                                                >  1:1698449/1‑150                                                                                                          TGCCTTGTAGGTCGTGACGCCGGC‑GCAGGTGATGCTGCTGGCGGCGTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATCGCCATCTACGGGCTCGGCGGCCTGGGCAAC                                                                   <  1:1685576/129‑1                                                                                                          TGCCTTGTAGGTCGTGACGCCGGC‑GCAGGTGATGCTGCTGGCGGCGTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATCGCCATCTACGGGCTCGGCGGCCTGGGCAAC                                                                   >  2:1685576/1‑129                                                                                                                                                     GGCGTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATCGCCATCTACGGGCTCGGCGGCCTGGGCAACCTGGCCCTGCAATATGCCAAGAATGTGTTCAACGCCAAAGTCATCGCCATCGACGTCAACGAA    <  2:880936/150‑1                                                                                                                                                      GCGTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATCGCCATCTACGGGCTCGGCGGCCTGGGCAACCTGGCCCTGCAATATGCCAAGAATGTGTTCAACGCCAAAGTCATCGCCATCGACG            <  1:42889/141‑1                                                                                                                                                      GCGTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATCGCCATCTACGGGCTCGGCGGCCTGGGCAACCTGGCCCTGCAATATGCCAAGAATGTGTTCAACGCCAAAGTCATCGCCATCGACG            >  2:42889/1‑141                                                                                                                                                      GCGTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATCGCCATCTACGGGCTCGGCGGCCTGGGCAACCTGGCCCTGAAATATGCCAAGAATGTGTTCAACGCCAAAGTCATCGCCATCGACGTCAACGAAG   <  1:782304/150‑1                                                                                                                                                       CGTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATCGCCATCTACGGGCTCGGCGGCCTGGGCAACCTGGCCCTGCAATATGCCAAGAATGTGTTCAACGCCAAAGTCATCGCCATCGACGTCAACGAAGA  <  1:1029002/150‑1                                                                                                                                                                                                                                                                                                              TTTGGCGTTGAACACATTCTTGGCATATTGCAGGGCCAGGTTGCCCAGGCCGCCGAGCCCGTAGATGGCGATCCATTGGCCGGGGCGGACGTTGGAGATTTTCACTGCCTTGTAGGTCGTGACGCCGGC‑GCAGGTGATGCTGCTGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4363522‑4363372 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTCACGACCTACAAGGCAGTGAAAATCTCCAACGTCCGCCCCGGCCAATGGATCGCCATCTACGGGCTCGGCGGCCTGGGCAACCTGGCCCTGCAATATGCCAAGAATGTGTTCAACGCCAAAGTCATCGCCATCGACGTCAACGAAGA  >  NC_002947/4363401‑4363548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.