| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4675379 | 59 (0.810) | 8 (0.130) | 5/202 | NT | 12.2% | intergenic (+32/+72) | PP_4137/chrR | outer membrane siderophore receptor/chromate reductase |
| ? | NC_002947 | = 4675391 | 67 (1.130) | intergenic (+44/+60) | PP_4137/chrR | outer membrane siderophore receptor/chromate reductase | |||||
GCGCAACCTGACCAACCAGCGCTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4675215‑4675379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtttacccgcgaatgcgtcGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTTGTAGGCCGGCGTCACGGTCG < NC_002947/4675391‑4675244 GCGCAACCTGACCAACCAGCGCTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTT > 1:1552894/1‑150 GCAACCTGACCAACCAGCGCTATGCAGCGACCGTGACGCCNGCCTACNACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTAC > 1:1107808/1‑150 GCAACCTGACCAACCAGCGCTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTAC > 2:1271497/1‑150 acCCTGACCAACCAGCGCTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCC < 2:1107808/148‑1 CAACCAGCGCTATGCAGCGCCCGTGACGCCGGCCTACAACGATGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGCAGAATTTGACGTGGATGCCGGGGTTTACTACACCTGCCGCTAACGGGTGGGCGCGGGTTTACCCGCGAATGt < 2:106781/150‑2 CAACCAGCGCTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGCTTACCCGCGAATGC > 1:1480122/1‑150 CAGCGCTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCG > 1:1114399/1‑150 GCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCATCCGCTGACGGGTGGGCGC < 1:1324870/119‑1 GCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCATCCGCTGACGGGTGGGCGC > 2:1324870/1‑119 GCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATG > 1:296764/1‑150 CGCCGGCCTCAAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGC < 1:399330/150‑1 CCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 2:1114399/150‑1 CCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 2:296764/150‑1 GCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATG < 1:1253837/102‑1 GCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATG > 2:1253837/1‑102 CCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 1:861742/118‑1 CCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG > 2:861742/1‑118 CGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG > 2:844313/1‑107 CGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGG < 1:844313/107‑1 CGGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTT < 2:1904531/150‑1 GGGTTTACCCGCGAATGTGTCGGCACATTCAATGACGCATTCGCGCGTAAACTCGCGCCCACCCGTCAGCGGAAGCTGTAGGAGACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTTG < 2:894046/150‑1 GGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAAC > 2:873605/1‑124 GGGTTTACCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAAC < 1:873605/124‑1 ACCCGAAAACGCGTCGGCAAATTCAATGACGCATTCGCGGGTACACCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTTGTAGGCC < 1:1051236/150‑1 CCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAATCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTC > 1:893521/1‑127 CCCGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAATCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTC < 2:893521/127‑1 CGCGAATGCGTCGGCAAATTCAATGGCGCATTCGCGGGTAGCGCCGCGCCCACACGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTTGTAGGCCGGC < 2:884897/150‑1 CGCGAATGCGTCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTTGTAGGCCGGC > 1:332444/1‑150 CGTCGGCAAATTCAATGACGCATTCGCGGGTAACCCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTTGTAGGCCGGCGTCACGGT < 1:1656364/150‑1 TCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTTGTAGGCCGGCGTCACGGTCG > 2:806533/1‑150 TCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCGCCCACCCGTCAGCGGAAGCT < 1:473278/58‑1 TCGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCGCCCACCCGTCAGCGGAAGCT > 2:473278/1‑58 GCGCAACCTGACCAACCAGCGCTATGCAGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGTTTACCCGCGAATGCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4675215‑4675379‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtttacccgcgaatgcgtcGGCAAATTCAATGACGCATTCGCGGGTAAACCCGCGCCCACCCGTCAGCGGAAGCTGTAGGAAACCCCGGCATACACGCCAAATCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTTGTAGGCCGGCGTCACGGTCG < NC_002947/4675391‑4675244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |