New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4711855 =	58 (0.790)	4 (0.060)	6/232	NT	7.1%	coding (41/2115 nt)	PP_4171	hypothetical protein
	?	NC_002947	4711877 =	50 (0.730)					coding (63/2115 nt)	PP_4171	hypothetical protein

GTACGGTCATGCTGCCCGGGACAGCGGCGGGGGATTGTTTCAGGCGTGTGGCGGTCAGAACCTGTGGCAGGTCGGTGTTGTCGATGAACAGGTCGTCGGCCACGGCCTGACCGCCGAGCAGGGCGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4711983‑4711855 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtcaGGCCGTGGCCGACGACCTGTTCATC  >  NC_002947/4711877‑4711901                                                                                                                                                            GTACGGTCATGCTGCCCGGGACAGCGGCGGGGGATTGTTTCAGGCGTGTGGCGGTCAGAACCTGTGGCAGGTCGGTGTTGTCGATGAACAGGTCGTCGGCCACGGCCTGACCGCCCTGCTCGGCGGTCAGGCCGTG                    >  1:441211/1‑136 GTACGGTCATGCTGCCCGGGACAGCGGCGGGGGATTGTTTCAGGCGTGTGGCGGTCAGAACCTGTGGCAGGTCGGTGTTGTCGATGAACAGGTCGTCGGCCACGGCCTGACCGCCCTGCTCGGCGGTCAGGCCGTG                    <  2:441211/136‑1                                                           AACCTGTGGCAGGTCGGTGTTGTCGATGAACAGGTCGTCGGCCACGGCCTGACCGCCCTGCTCGGCGGTCAGGC                        >  1:438485/1‑74                                                           AACCTGTGGCAGGTCGGTGTTGTCGATGAACAGGTCGTCGGCCACGGCCTGACCGCCCTGCTCGGCGGTCAGGC                        <  2:438485/74‑1                                                                                                            TGACCGCCGAGCAGGGCGGTCAGGCCGTGGCCGACGACCTGTTCATC  >  1:1241105/1‑47                                                                                                            TGACCGCCGAGCAGGGCGGTCAGGCCGTGGCCGACGACCTGTTCATC  <  2:1241105/47‑1                                                                                                                                                            GTACGGTCATGCTGCCCGGGACAGCGGCGGGGGATTGTTTCAGGCGTGTGGCGGTCAGAACCTGTGGCAGGTCGGTGTTGTCGATGAACAGGTCGTCGGCCACGGCCTGACCGCCGAGCAGGGCGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4711983‑4711855 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtcaGGCCGTGGCCGACGACCTGTTCATC  >  NC_002947/4711877‑4711901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.